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Danang Crysnanto
Danang Crysnanto
Senior Data Scientist, Bioinformatics, AstraZeneca
在 astrazeneca.com 的电子邮件经过验证
标题
引用次数
引用次数
年份
Novel functional sequences uncovered through a bovine multiassembly graph
D Crysnanto, AS Leonard, ZH Fang, H Pausch
Proceedings of the National Academy of Sciences 118 (20), e2101056118, 2021
672021
Assessing genomic diversity and signatures of selection in Original Braunvieh cattle using whole-genome sequencing data
M Bhati, NK Kadri, D Crysnanto, H Pausch
BMC genomics 21, 1-14, 2020
632020
Bovine breed-specific augmented reference graphs facilitate accurate sequence read mapping and unbiased variant discovery
D Crysnanto, H Pausch
Genome Biology 21 (184), 1-27, 2020
592020
Bovine breed-specific augmented reference graphs facilitate accurate sequence read mapping and unbiased variant discovery
D Crysnanto, H Pausch
BioRxiv, 2019.12. 20.882423, 2020
592020
Structural variant-based pangenome construction has low sensitivity to variability of haplotype-resolved bovine assemblies
AS Leonard, D Crysnanto, ZH Fang, MP Heaton, BL Vander Ley, ...
Nature communications 13 (1), 3012, 2022
472022
Activation of cryptic splicing in bovine WDR19 is associated with reduced semen quality and male fertility
M Hiltpold, G Niu, NK Kadri, D Crysnanto, ZH Fang, M Spengeler, ...
PLoS genetics 16 (5), e1008804, 2020
392020
Accurate sequence variant genotyping in cattle using variation-aware genome graphs
D Crysnanto, C Wurmser, H Pausch
Genetics Selection Evolution 51 (1), 21, 2019
302019
Graph construction method impacts variation representation and analyses in a bovine super-pangenome
AS Leonard, D Crysnanto, XM Mapel, M Bhati, H Pausch
Genome Biology 24 (1), 124, 2023
272023
Structural variation and introgression from wild populations in East Asian cattle genomes confer adaptation to local environment
X Xia, F Zhang, S Li, X Luo, L Peng, Z Dong, H Pausch, AS Leonard, ...
Genome Biology 24 (1), 211, 2023
222023
Characterization of a haplotype-reference panel for genotyping by low-pass sequencing in Swiss Large White pigs
A Nosková, M Bhati, NK Kadri, D Crysnanto, S Neuenschwander, A Hofer, ...
BMC genomics 22, 1-14, 2021
202021
Widespread gene duplication and adaptive evolution in the RNA interference pathways of the Drosophila obscura group
D Crysnanto, DJ Obbard
BMC evolutionary biology 19, 1-12, 2019
142019
Comparison of methods for building pangenome graphs
D Crysnanto, A Leonard, H Pausch
Proceedings of 12th World Congress on Genetics Applied to Livestock …, 2022
72022
Deletion of porcine BOLL is associated with defective acrosomes and subfertility in Yorkshire boars
A Nosková, C Wurmser, D Crysnanto, A Sironen, P Uimari, R Fries, ...
Animal genetics 51 (6), 945-949, 2020
72020
A 63‐bp insertion in exon 2 of the porcine KIF21A gene is associated with arthrogryposis multiplex congenita
ZH Fang, A Nosková, D Crysnanto, S Neuenschwander, P Vögeli, ...
Animal genetics 51 (5), 820-823, 2020
72020
Sequence read mapping and variant discovery from bovine breed-specific augmented reference graphs
D Crysnanto, H Pausch
bioRxiv, 2019
22019
Establishing a Bovine Pangenome from Multiple Haplotype-Resolved Assemblies
A Leonard, D Crysnanto, Z Fang, MP Heaton, BL Vander Ley, C Herrera, ...
Plant and Animal Genome XXIX Conference (January 8-12, 2022), 2022
2022
Deciphering the genomic architecture and patterns of selection in Swiss cattle breeds
M Bhati, NK Kadri, D Crysnanto, H Pausch
Book of Abstracts of the 72nd Annual Meeting of the European Federation of …, 2021
2021
En route to routine genotyping by low-pass sequencing in Swiss pig breeds
A Poublan-Couzardot, M Bhati, NK Kadri, D Crysnanto, ...
Book of Abstracts of the 72nd Annual Meeting of the European Federation of …, 2021
2021
Establishing Bovine Pangenome Graphs
D Crysnanto
ETH Zurich, 2021
2021
Mapping Sequencing Reads to Bovine Breed-Specific Genome Graphs
D Crysnanto, H Pausch
Online Abstracts: International Plant and Animal Genomes XXVIII Conference …, 2020
2020
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