Minimal information for studies of extracellular vesicles 2018 (MISEV2018): a position statement of the International Society for Extracellular Vesicles and update of the … C Théry, KW Witwer, E Aikawa, MJ Alcaraz, JD Anderson, ... Journal of extracellular vesicles 7 (1), 1535750, 2018 | 8612 | 2018 |
Global transcript structure resolution of high gene density genomes through multi-platform data integration T O'Grady, X Wang, K Höner zu Bentrup, M Baddoo, M Concha, ... Nucleic acids research 44 (18), e145-e145, 2016 | 92 | 2016 |
High-throughput RNA sequencing-based virome analysis of 50 lymphoma cell lines from the Cancer Cell Line Encyclopedia project S Cao, MJ Strong, X Wang, WN Moss, M Concha, Z Lin, T O'Grady, ... Journal of virology 89 (1), 713-729, 2015 | 91 | 2015 |
Global bidirectional transcription of the Epstein-Barr virus genome during reactivation T O'Grady, S Cao, MJ Strong, M Concha, X Wang, S Splinter BonDurant, ... Journal of virology 88 (3), 1604-1616, 2014 | 71 | 2014 |
AnnTools: a comprehensive and versatile annotation toolkit for genomic variants V Makarov, T O'Grady, G Cai, J Lihm, JD Buxbaum, S Yoon Bioinformatics 28 (5), 724-725, 2012 | 61 | 2012 |
New Noncoding Lytic Transcripts Derived from the Epstein-Barr Virus Latency Origin of Replication, oriP, Are Hyperedited, Bind the Paraspeckle Protein, NONO … S Cao, W Moss, T O'Grady, M Concha, MJ Strong, X Wang, Y Yu, ... Journal of virology 89 (14), 7120-7132, 2015 | 59 | 2015 |
Epstein-Barr virus and human herpesvirus 6 detection in a non-Hodgkin's diffuse large B-cell lymphoma cohort by using RNA sequencing MJ Strong, T O'Grady, Z Lin, G Xu, M Baddoo, C Parsons, K Zhang, ... Journal of virology 87 (23), 13059-13062, 2013 | 49 | 2013 |
Sorting and packaging of RNA into extracellular vesicles shape intracellular transcript levels T O’Grady, MS Njock, M Lion, J Bruyr, E Mariavelle, B Galvan, A Boeckx, ... BMC biology 20 (1), 72, 2022 | 47 | 2022 |
Endothelial extracellular vesicles promote tumour growth by tumour‐associated macrophage reprogramming MS Njock, T O'Grady, O Nivelles, M Lion, S Jacques, M Cambier, ... Journal of extracellular vesicles 11 (6), e12228, 2022 | 27 | 2022 |
The HTLV-1 viral oncoproteins Tax and HBZ reprogram the cellular mRNA splicing landscape C Vandermeulen, T O’grady, J Wayet, B Galvan, S Maseko, M Cherkaoui, ... PLoS pathogens 17 (9), e1009919, 2021 | 25 | 2021 |
Genome-wide transcript structure resolution reveals abundant alternate isoform usage from murine gammaherpesvirus 68 T O’Grady, A Feswick, BA Hoffman, Y Wang, EM Medina, M Kara, ... Cell reports 27 (13), 3988-4002. e5, 2019 | 24 | 2019 |
DHX15-independent roles for TFIP11 in U6 snRNA modification, U4/U6. U5 tri-snRNP assembly and pre-mRNA splicing fidelity A Duchemin, T O’grady, S Hanache, A Mereau, M Thiry, L Wacheul, ... Nature communications 12 (1), 6648, 2021 | 15 | 2021 |
ERG transcription factors have a splicing regulatory function involving RBFOX2 that is altered in the EWS-FLI1 oncogenic fusion O Saulnier, K Guedri-Idjouadiene, MM Aynaud, A Chakraborty, J Bruyr, ... Nucleic Acids Research 49 (9), 5038-5056, 2021 | 13 | 2021 |
Postdoctoral scholars: a forgotten library constituency? T O'Grady, PS Beam Science & Technology Libraries 30 (1), 76-79, 2011 | 13 | 2011 |
Gammaherpesvirus readthrough transcription generates a long non-coding RNA that is regulated by antisense miRNAs and correlates with enhanced lytic replication in vivo M Kara, T O’Grady, ER Feldman, A Feswick, Y Wang, EK Flemington, ... Non-coding RNA 5 (1), 6, 2019 | 12 | 2019 |
Dephosphorylation of HDAC4 by PP2A-Bδ unravels a new role for the HDAC4/MEF2 axis in myoblast fusion A Veloso, M Martin, J Bruyr, T O’Grady, C Deroanne, D Mottet, JC Twizere, ... Cell death & disease 10 (7), 512, 2019 | 10 | 2019 |
Bioinformatics: A brief review of resources on the Web T O’Grady College & Research Libraries News 69 (7), 404-408, 2008 | 6 | 2008 |
SpliceTools, a suite of downstream RNA splicing analysis tools to investigate mechanisms and impact of alternative splicing EK Flemington, SA Flemington, TM O’Grady, M Baddoo, T Nguyen, ... Nucleic Acids Research 51 (7), e42-e42, 2023 | 5 | 2023 |
The transcription factor c-Jun inhibits RBM39 to reprogram pre-mRNA splicing during genotoxic stress F Lemaitre, F Chakrama, T O’Grady, O Peulen, G Rademaker, A Deward, ... Nucleic Acids Research 50 (22), 12768-12789, 2022 | 4 | 2022 |
Reversal of splicing infidelity is a pre-activation step in B cell differentiation TM O'Grady, M Baddoo, SA Flemington, EY Ishaq, NA Ungerleider, ... Frontiers in Immunology 13, 2022 | 3 | 2022 |