| One thousand plant transcriptomes and the phylogenomics of green plants Nature 574 (7780), 679-685, 2019 | 1250 | 2019 |
| Phylotranscriptomic analysis of the origin and early diversification of land plants NJ Wickett, S Mirarab, N Nguyen, T Warnow, E Carpenter, N Matasci, ... Proceedings of the National Academy of Sciences 111 (45), E4859-E4868, 2014 | 1237 | 2014 |
| Data access for the 1,000 Plants (1KP) project N Matasci, LH Hung, Z Yan, EJ Carpenter, NJ Wickett, S Mirarab, ... Gigascience 3 (1), 2047-217X-3-17, 2014 | 589 | 2014 |
| The taxonomic name resolution service: an online tool for automated standardization of plant names B Boyle, N Hopkins, Z Lu, JA Raygoza Garay, D Mozzherin, T Rees, ... BMC bioinformatics 14, 1-15, 2013 | 549 | 2013 |
| The iPlant collaborative: cyberinfrastructure for plant biology SA Goff, M Vaughn, S McKay, E Lyons, AE Stapleton, D Gessler, ... Frontiers in plant science 2, 34, 2011 | 537 | 2011 |
| Access to RNA-sequencing data from 1,173 plant species: The 1000 Plant transcriptomes initiative (1KP) EJ Carpenter, N Matasci, S Ayyampalayam, S Wu, J Sun, J Yu, ... GigaScience 8 (10), giz126, 2019 | 130 | 2019 |
| Vitis phylogenomics: hybridization intensities from a SNP array outperform genotype calls AJ Miller, N Matasci, H Schwaninger, MK Aradhya, B Prins, GY Zhong, ... PloS one 8 (11), e78680, 2013 | 55 | 2013 |
| Phylotastic! Making tree-of-life knowledge accessible, reusable and convenient A Stoltzfus, H Lapp, N Matasci, H Deus, B Sidlauskas, CM Zmasek, ... BMC bioinformatics 14, 1-17, 2013 | 48 | 2013 |
| Data access for the 1,000 Plants (1KP) project. GigaScience 3: 17 N Matasci, LH Hung, Z Yan, EJ Carpenter, NJ Wickett, S Mirarab, ... Article PubMed PubMed Central, 2014 | 40 | 2014 |
| Predicting antibody developability from sequence using machine learning X Chen, T Dougherty, C Hong, R Schibler, YC Zhao, R Sadeghi, ... biorxiv, 2020.06. 18.159798, 2020 | 22 | 2020 |
| Monitoring dynamic cytotoxic chemotherapy response in castration-resistant prostate cancer using plasma cell-free DNA (cfDNA) K Patsch, N Matasci, A Soundararajan, P Diaz, DB Agus, D Ruderman, ... BMC Research Notes 12, 1-7, 2019 | 21 | 2019 |
| Imaging-based machine learning analysis of patient-derived tumor organoid drug response ER Spiller, N Ung, S Kim, K Patsch, R Lau, C Strelez, C Doshi, S Choung, ... Frontiers in oncology 11, 771173, 2021 | 18 | 2021 |
| Metadata Mapper: a web service for mapping data between independent visual analysis components, guided by perceptual rules BE Rogowitz, N Matasci Human vision and electronic imaging XVI 7865, 165-177, 2011 | 10 | 2011 |
| Adaptation of imaging mass cytometry to explore the single cell alloimmune landscape of liver transplant rejection N Ung, C Goldbeck, C Man, J Hoeflich, R Sun, A Barbetta, N Matasci, ... Frontiers in Immunology 13, 831103, 2022 | 9 | 2022 |
| Phylogenetic analysis with the iPlant discovery environment N Matasci, S McKay Current protocols in bioinformatics 42 (1), 6.13. 1-6.13. 13, 2013 | 8 | 2013 |
| Data mining with iPlant: A meeting report from the 2013 GARNet workshop, Data mining with iPlant L Martin, C Cook, N Matasci, J Williams, R Bastow Journal of experimental botany 66 (1), 1-6, 2015 | 3 | 2015 |
| Causal personalized treatment estimation framework using real-world electronic health record (EHR) data to inform cancer care decisions S Srivatsa, D Walsh, M Aljehani, J Weinreb, N Becker, BH Ellis, R George, ... Cancer Research 84 (6_Supplement), 6467-6467, 2024 | 1 | 2024 |
| Immune biomarkers associated with COVID-19 disease severity in an urban, hospitalized population AB Chambliss, M Aljehani, B Tran, X Chen, E Elton, C Garri, N Ung, ... Practical Laboratory Medicine 36, e00323, 2023 | 1 | 2023 |
| Sequencing protocols for the one thousand plant transcriptomes initiative EJ Carpenter, N Matasci, S Wu, J Sun, J Yu, FRJ Vieira, C Bowler, ... | 1 | 2019 |
| A novel thin plate spline methodology to model tissue surfaces and quantify tumor cell invasion in organ-on-chip models E Elton, C Strelez, N Ung, R Perez, K Ghaffarian, D Hixon, N Matasci, ... SLAS Discovery, 100163, 2024 | | 2024 |
