| ampvis2: an R package to analyse and visualise 16S rRNA amplicon data KS Andersen, RH Kirkegaard, SM Karst, M Albertsen BioRxiv, 299537, 2018 | 511 | 2018 |
| MiDAS 3: an ecosystem-specific reference database, taxonomy and knowledge platform for activated sludge and anaerobic digesters reveals species-level microbiome composition of … M Nierychlo, KS Andersen, Y Xu, N Green, C Jiang, M Albertsen, ... Water Research 182, 115955, 2020 | 208 | 2020 |
| MiDAS 4: A global catalogue of full-length 16S rRNA gene sequences and taxonomy for studies of bacterial communities in wastewater treatment plants MKD Dueholm, M Nierychlo, KS Andersen, V Rudkjøbing, S Knutsson, ... Nature communications 13 (1), 1908, 2022 | 201 | 2022 |
| Generation of comprehensive ecosystem-specific reference databases with species-level resolution by high-throughput full-length 16S rRNA gene sequencing and automated taxonomy … MS Dueholm, KS Andersen, SJ McIlroy, JM Kristensen, E Yashiro, ... MBio 11 (5), 10.1128/mbio. 01557-20, 2020 | 100* | 2020 |
| Characterizing the growing microorganisms at species level in 46 anaerobic digesters at Danish wastewater treatment plants: A six-year survey on microbial community structure … C Jiang, M Peces, MH Andersen, S Kucheryavskiy, M Nierychlo, ... Water research 193, 116871, 2021 | 67 | 2021 |
| Mass-immigration determines the assembly of activated sludge microbial communities G Dottorini, TY Michaelsen, S Kucheryavskiy, KS Andersen, ... Proceedings of the National Academy of Sciences 118 (27), e2021589118, 2021 | 62 | 2021 |
| Microbial communities across activated sludge plants show recurring species-level seasonal patterns M Peces, G Dottorini, M Nierychlo, KS Andersen, MKD Dueholm, ... ISME communications 2 (1), 18, 2022 | 20 | 2022 |
| MiDAS 4: a global catalogue of full-length 16S rRNA gene sequences and taxonomy for studies of bacterial communities in wastewater treatment plants. Nat Commun 13: 1908 MKD Dueholm, M Nierychlo, KS Andersen, V Rudkjøbing, S Knutsson, ... | 14 | 2022 |
| ampvis2: an R package to analyse and visualise 16S rRNA amplicon data. bioRxiv. 2018: 299537 KS Andersen, RH Kirkegaard, SM Karst, M Albertsen DOI 10, 299537, 0 | 14 | |
| Consortium MG. 2021. MiDAS 4: a global catalogue of full-length 16S rRNA gene sequences and taxonomy for studies of bacterial communities in wastewater treatment plants MS Dueholm, M Nierychlo, KS Andersen, V Rudkjøbing, S Knutsson, ... bioRxiv, 1908 | 12 | 1908 |
| Albertsen, M. & Nielsen, PH 2021 MiDAS 4: A Global Catalogue of Full-Length 16S rRNA Gene Sequences and Taxonomy for Studies of Bacterial Communities in Wastewater Treatment … MS Dueholm, M Nierychlo, KS Andersen, V Rudkjøbing, S Knutsson bioRxiv, 0 | 11 | |
| MiDAS 5: Global diversity of bacteria and archaea in anaerobic digesters MKD Dueholm, KS Andersen, AKC Korntved, V Rudkjøbing, M Alves, ... Nature Communications 15 (1), 5361, 2024 | 9 | 2024 |
| Full-scale activated sludge transplantation reveals a highly resilient community structure G Dottorini, DS Wágner, M Stokholm-Bjerregaard, S Kucheryavskiy, ... Water Research 229, 119454, 2023 | 7 | 2023 |
| Author Correction: MiDAS 4: A global catalogue of full-length 16S rRNA gene sequences and taxonomy for studies of bacterial communities in wastewater treatment plants MKD Dueholm, M Nierychlo, KS Andersen, V Rudkjøbing, S Knutsson, ... Nature Communications 13 (1), 4017, 2022 | 7 | 2022 |
| Species-level diversity of the filamentous Candidatus Microthrix in Danish full-scale WWTPs and their influence on sludge settling properties MA Nierychlo, L Thomsen, KS Andersen, MS Dueholm, F Petriglieri, ... | 1 | 2019 |
| High resolution identification of microbes and prediction of community dynamics in activated sludge plants KS Andersen | | 2023 |
| msdueholm/MiDAS4 MKD Dueholm, M Nierychlo, KS Andersen, V Rudkjøbing, S Knutsson, ... Github, 2022 | | 2022 |
| The Microbiome of Nutrient Removal Plants Across the World MKD Dueholm, KS Andersen, MA Nierychlo, M Albertsen, VR Jørgensen, ... | | 2021 |
| Deciphering the diversity of filamentous bacteria across the world MA Nierychlo, L Thomsen, F Petriglieri, Z Kondrotaite, CM Singleton, ... | | 2021 |
| The New MiDAS Field Guide:: Comprehensive Online Ecosystem-specific Database of Microorganisms in Wastewater Treatment Systems SH Hansen, MA Nierychlo, Y Xu, ND Green, KS Andersen, MS Dueholm, ... | | 2020 |
