| SQANTI: extensive characterization of long-read transcript sequences for quality control in full-length transcriptome identification and quantification M Tardaguila, L De La Fuente, C Marti, C Pereira, FJ Pardo-Palacios, ... Genome research 28 (3), 396-411, 2018 | 347 | 2018 |
| T cells in nonlymphoid tissues give rise to lymph-node-resident memory T cells LK Beura, S Wijeyesinghe, EA Thompson, MG Macchietto, PC Rosato, ... Immunity 48 (2), 327-338. e5, 2018 | 253 | 2018 |
| Activated entomopathogenic nematode infective juveniles release lethal venom proteins D Lu, M Macchietto, D Chang, MM Barros, J Baldwin, A Mortazavi, ... PloS pathogens 13 (4), e1006302, 2017 | 124 | 2017 |
| Comparative genomics of Steinernema reveals deeply conserved gene regulatory networks AR Dillman, M Macchietto, CF Porter, A Rogers, B Williams, ... Genome biology 16, 1-21, 2015 | 96 | 2015 |
| The Draft Genome and Transcriptome of Panagrellus redivivus Are Shaped by the Harsh Demands of a Free-Living Lifestyle J Srinivasan, AR Dillman, MG Macchietto, L Heikkinen, M Lakso, ... Genetics 193 (4), 1279-1295, 2013 | 72 | 2013 |
| Identification of gut microbiota and microbial metabolites regulated by an antimicrobial peptide lipocalin 2 in high fat diet-induced obesity X Qiu, MG Macchietto, X Liu, Y Lu, Y Ma, H Guo, M Saqui-Salces, ... International Journal of Obesity 45 (1), 143-154, 2021 | 59 | 2021 |
| Virus-induced transposable element expression up-regulation in human and mouse host cells MG Macchietto, RA Langlois, SS Shen Life science alliance 3 (2), 2020 | 49 | 2020 |
| Distinct antiviral signatures revealed by the magnitude and round of influenza virus replication in vivo LE Sjaastad, EJ Fay, JK Fiege, MG Macchietto, IA Stone, MW Markman, ... Proceedings of the National Academy of Sciences 115 (38), 9610-9615, 2018 | 41 | 2018 |
| The impact of TCR signal strength on resident memory T cell formation during influenza virus infection JK Fiege, IA Stone, EJ Fay, MW Markman, S Wijeyesinghe, ... The Journal of Immunology 203 (4), 936-945, 2019 | 40 | 2019 |
| Adapting the smart-seq2 protocol for robust single worm RNA-seq L Serra, DZ Chang, M Macchietto, K Williams, R Murad, D Lu, AR Dillman, ... Bio-protocol 8 (4), e2729-e2729, 2018 | 34 | 2018 |
| Host-and helminth-derived endocannabinoids that have effects on host immunity are generated during infection HM Batugedara, D Argueta, JC Jang, D Lu, M Macchietto, J Kaur, S Ge, ... Infection and immunity 86 (11), 10.1128/iai. 00441-18, 2018 | 19 | 2018 |
| Comparative Transcriptomics of Steinernema and Caenorhabditis Single Embryos Reveals Orthologous Gene Expression Convergence during Late Embryogenesis M Macchietto, D Angdembey, N Heidarpour, L Serra, B Rodriguez, ... Genome biology and evolution 9 (10), 2681-2696, 2017 | 19 | 2017 |
| Cell type-and replication stage-specific influenza virus responses in vivo EJ Fay, SL Aron, MG Macchietto, MW Markman, K Esser-Nobis, M Gale Jr, ... PLoS Pathogens 16 (8), e1008760, 2020 | 18 | 2020 |
| Hybrid Assembly of the Genome of the Entomopathogenic Nematode Steinernema carpocapsae Identifies the X-Chromosome L Serra, M Macchietto, A Macias-Muñoz, CJ McGill, IM Rodriguez, ... G3: Genes, Genomes, Genetics 9 (8), 2687-2697, 2019 | 18 | 2019 |
| Corrigendum: SQANTI: extensive characterization of long-read transcript sequences for quality control in full-length transcriptome identification and quantification M Tardaguila, L De La Fuente, C Marti, C Pereira, FJ Pardo-Palacios, ... Genome research 28 (7), 1096, 2018 | 17 | 2018 |
| Whole‐genome assembly and annotation of northern wild rice, Zizania palustris L., supports a whole‐genome duplication in the Zizania genus M Haas, T Kono, M Macchietto, R Millas, L McGilp, M Shao, J Duquette, ... The Plant Journal 107 (6), 1802-1818, 2021 | 13 | 2021 |
| Allergen-induced DNA release by the airway epithelium amplifies type 2 immunity Y Srisomboon, K Iijima, M Colwell, PJ Maniak, M Macchietto, C Faulk, ... Journal of Allergy and Clinical Immunology 151 (2), 494-508. e6, 2023 | 11 | 2023 |
| Effects of the SLICK1 mutation in PRLR on regulation of core body temperature and global gene expression in liver in cattle F Sosa, JEP Santos, DO Rae, CC Larson, M Macchietto, JE Abrahante, ... animal 16 (5), 100523, 2022 | 11 | 2022 |
| Systemic lipolysis promotes physiological fitness in Drosophila melanogaster L Shang, E Aughey, H Kim, TD Heden, L Wang, CP Najt, N Esch, ... Aging (albany NY) 14 (16), 6481, 2022 | 5 | 2022 |
| Host and helminth-derived endocannabinoids are generated during infection with effects on host immunity HM Batugedara, D Argueta, JC Jang, D Lu, M Macchietto, J Kaur, S Ge, ... Infect. Immun 86 (11), 10.1128, 2018 | 4 | 2018 |
