Improved prediction of protein-protein interactions using AlphaFold2 P Bryant, G Pozzati, A Elofsson Nature communications 13 (1), 1265, 2022 | 554 | 2022 |
A structural biology community assessment of AlphaFold2 applications M Akdel, DEV Pires, EP Pardo, J Jänes, AO Zalevsky, B Mészáros, ... Nature Structural & Molecular Biology 29 (11), 1056-1067, 2022 | 391 | 2022 |
Towards a structurally resolved human protein interaction network DF Burke, P Bryant, I Barrio-Hernandez, D Memon, G Pozzati, A Shenoy, ... Nature Structural & Molecular Biology 30 (2), 216-225, 2023 | 136 | 2023 |
Predicting the structure of large protein complexes using AlphaFold and Monte Carlo tree search P Bryant, G Pozzati, W Zhu, A Shenoy, P Kundrotas, A Elofsson Nature communications 13 (1), 6028, 2022 | 120 | 2022 |
Estimating the impact of mobility patterns on COVID-19 infection rates in 11 European countries P Bryant, A Elofsson PeerJ 8, e9879, 2020 | 63 | 2020 |
Deep learning for protein complex structure prediction P Bryant Current opinion in structural biology 79, 102529, 2023 | 18 | 2023 |
Consensus paper: cerebellum and ageing A Arleo, M Bareš, JA Bernard, HR Bogoian, MMK Bruchhage, P Bryant, ... The Cerebellum 23 (2), 802-832, 2024 | 15 | 2024 |
EvoBind: in silico directed evolution of peptide binders with AlphaFold P Bryant, A Elofsson bioRxiv, 2022.07. 23.501214, 2022 | 15 | 2022 |
Recurrent, low-frequency coding variants contributing to colorectal cancer in the Swedish population X Jiao, W Liu, H Mahdessian, P Bryant, J Ringdahl, M Timofeeva, ... PloS one 13 (3), e0193547, 2018 | 12 | 2018 |
Structure prediction of protein-ligand complexes from sequence information with Umol P Bryant, A Kelkar, A Guljas, C Clementi, F Noé Nature Communications 15 (1), 4536, 2024 | 8 | 2024 |
Linkage analysis revealed risk loci on 6p21 and 18p11. 2-q11. 2 in familial colon and rectal cancer, respectively S von Holst, X Jiao, W Liu, V Kontham, J Thutkawkorapin, J Ringdahl, ... European Journal of Human Genetics 27 (8), 1286-1295, 2019 | 7 | 2019 |
Structure prediction of alternative protein conformations P Bryant bioRxiv, 2023.09. 25.559256, 2023 | 6 | 2023 |
The limits of estimating COVID-19 intervention effects using Bayesian models P Bryant, A Elofsson medRxiv, 2020.08. 14.20175240, 2020 | 6 | 2020 |
Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning P Bryant, F Noé bioRxiv, 2023.04. 15.536993, 2023 | 5 | 2023 |
Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile P Bryant, F Noe bioRxiv, 2023.07. 04.547638, 2023 | 4 | 2023 |
Peptide binder design with inverse folding and protein structure prediction P Bryant, A Elofsson Communications Chemistry 6 (1), 229, 2023 | 3 | 2023 |
The relationship between ageing and changes in the human blood and brain methylomes P Bryant, A Elofsson NAR Genomics and Bioinformatics 4 (1), lqac001, 2022 | 3 | 2022 |
Exome sequencing in a Swedish family with PMS2 mutation with varying penetrance of colorectal cancer: investigating the presence of genetic risk modifiers in colorectal cancer risk P Bryant, SW Bernstedt, J Thutkawkorapin, AS Backman, A Lindblom, ... European Journal of Cancer Prevention 32 (2), 113-118, 2023 | 2 | 2023 |
A Swedish Genome-Wide Haplotype Association Analysis Identifies a Novel Breast Cancer Susceptibility Locus in 8p21. 2 and Characterizes Three Loci on Chromosomes 10, 11 and 16 E Barnekow, W Liu, HT Helgadottir, K Michailidou, J Dennis, P Bryant, ... Cancers 14 (5), 1206, 2022 | 2 | 2022 |
Decomposing structural response due to sequence changes in protein domains with machine learning P Bryant, A Elofsson Journal of molecular biology 432 (16), 4435-4446, 2020 | 1 | 2020 |