ChAdOx1 interacts with CAR and PF4 with implications for thrombosis with thrombocytopenia syndrome AT Baker, RJ Boyd, D Sarkar, A Teijeira-Crespo, CK Chan, E Bates, ... Science Advances 7 (49), eabl8213, 2021 | 144 | 2021 |
Prediction of protein assemblies, the next frontier: The CASP14‐CAPRI experiment MF Lensink, G Brysbaert, T Mauri, N Nadzirin, S Velankar, RAG Chaleil, ... Proteins: Structure, Function, and Bioinformatics, 2021 | 85 | 2021 |
Cryo-EM model validation recommendations based on outcomes of the 2019 EMDataResource challenge CL Lawson, A Kryshtafovych, PD Adams, PV Afonine, ML Baker, ... Nature methods 18 (2), 156-164, 2021 | 83 | 2021 |
Temperature distribution in multi-layer skin tissue in presence of a tumor D Sarkar, A Haji-Sheikh, A Jain International Journal of Heat and Mass Transfer 91, 602-610, 2015 | 65 | 2015 |
CryoFold: Determining protein structures and data-guided ensembles from cryo-EM density maps M Shekhar, G Terashi, C Gupta, D Sarkar, G Debussche, NJ Sisco, ... Matter 4 (10), 3195-3216, 2021 | 35* | 2021 |
Analytical modeling of temperature distribution in an anisotropic cylinder with circumferentially-varying convective heat transfer D Sarkar, K Shah, A Haji-Sheikh, A Jain International Journal of Heat and Mass Transfer 79, 1027-1033, 2014 | 35 | 2014 |
The ugly, bad, and good stories of large-scale biomolecular simulations C Gupta, D Sarkar, DP Tieleman, A Singharoy Current Opinion in Structural Biology 73, 102338, 2022 | 34 | 2022 |
Flexible fitting of small molecules into electron microscopy maps using molecular dynamics simulations with neural network potentials JW Vant, SLJ Lahey, K Jana, M Shekhar, D Sarkar, BH Munk, ... Journal of chemical information and modeling 60 (5), 2591-2604, 2020 | 26 | 2020 |
Computational structure modeling for diverse categories of macromolecular interactions T Aderinwale, CW Christoffer, D Sarkar, E Alnabati, D Kihara Current opinion in structural biology 64, 1-8, 2020 | 25 | 2020 |
Non-invasive, transient determination of the core temperature of a heat-generating solid body D Anthony, D Sarkar, A Jain Scientific reports 6 (1), 35886, 2016 | 25 | 2016 |
Steady state and transient analytical modeling of non-uniform convective cooling of a microprocessor chip due to jet impingement S Luhar, D Sarkar, A Jain International Journal of Heat and Mass Transfer 110, 768-777, 2017 | 20 | 2017 |
Modeling SARS‐CoV‐2 proteins in the CASP‐commons experiment A Kryshtafovych, J Moult, WM Billings, D Della Corte, K Fidelis, S Kwon, ... Proteins: Structure, Function, and Bioinformatics 89 (12), 1987-1996, 2021 | 19 | 2021 |
Non-Arrhenius Reaction-Diffusion Kinetics for Protein Inactivation over a Large Temperature Range# D Sarkar, P Kang, SO Nielsen, Z Qin ACS Nano, 2019 | 15 | 2019 |
Data-guided Multi-Map variables for ensemble refinement of molecular movies JW Vant, D Sarkar, E Streitwieser, G Fiorin, R Skeel, JV Vermaas, ... The Journal of Chemical Physics 153 (21), 2020 | 13 | 2020 |
Corrections for lateral conduction error in steady state heat transfer measurements D Sarkar, A Jain, RJ Goldstein, V Srinivasan International Journal of Thermal Sciences 109, 413-423, 2016 | 13 | 2016 |
Thermal conduction in an orthotropic sphere with circumferentially varying convection heat transfer D Sarkar, A Haji-Sheikh, A Jain International Journal of Heat and Mass Transfer 96, 406-412, 2016 | 13 | 2016 |
A view of the thermal wave behaviors in thin plates D Sarkar, A Haji-Sheikh International communications in heat and mass transfer 39 (8), 1009-1017, 2012 | 12 | 2012 |
Exploring cryo-electron microscopy with molecular dynamics JW Vant, D Sarkar, J Nguyen, AT Baker, JV Vermaas, A Singharoy Biochemical Society Transactions 50 (1), 569-581, 2022 | 11 | 2022 |
Contactless, non-intrusive core temperature measurement of a solid body in steady-state D Anthony, D Sarkar, A Jain International Journal of Heat and Mass Transfer 101, 779-788, 2016 | 11 | 2016 |
Genotype & Phenotype in Lowe Syndrome: Specific OCRL1 patient mutations differentially impact cellular phenotypes S Ramadesikan, L Skiba, J Lee, K Madhivanan, D Sarkar, ADL Fuente, ... Human Molecular Genetics, 2021 | 8 | 2021 |