| Genome-wide analysis of influenza viral RNA and nucleoprotein association N Lee, V Le Sage, AV Nanni, DJ Snyder, VS Cooper, SS Lakdawala Nucleic acids research 45 (15), 8968-8977, 2017 | 104 | 2017 |
| Genome assembly and population genomic analysis provide insights into the evolution of modern sweet corn Y Hu, V Colantonio, BSF Müller, KA Leach, A Nanni, C Finegan, B Wang, ... Nature Communications 12 (1), 1227, 2021 | 62 | 2021 |
| Non-uniform and non-random binding of nucleoprotein to influenza A and B viral RNA V Le Sage, AV Nanni, AR Bhagwat, DJ Snyder, VS Cooper, ... Viruses 10 (10), 522, 2018 | 32 | 2018 |
| SQANTI3: curation of long-read transcriptomes for accurate identification of known and novel isoforms FJ Pardo-Palacios, A Arzalluz-Luque, L Kondratova, P Salguero, ... Nature Methods 21 (5), 793-797, 2024 | 17 | 2024 |
| Identification of host RNAs that interact with EBV noncoding RNA EBER2 AV Nanni, N Lee RNA biology 15 (9), 1181-1191, 2018 | 7 | 2018 |
| Sex-Biased Expression Is Associated With Chromatin State in Drosophila melanogaster and Drosophila simulans AV Nanni, N Martinez, R Graze, A Morse, JRB Newman, V Jain, S Vlaho, ... Molecular Biology and Evolution 40 (5), msad078, 2023 | 6 | 2023 |
| Non-uniform and non-random binding of nucleoprotein to influenza A and B viral RNA. Viruses 10: E522 V Le Sage, AV Nanni, AR Bhagwat, DJ Snyder, VS Cooper, ... | 6 | 2018 |
| Estimating transcriptome complexities across eukaryotes JE Titus-McQuillan, AV Nanni, LM McIntyre, RL Rogers BMC genomics 24 (1), 254, 2023 | 2 | 2023 |
| The evolution of splicing: transcriptome complexity and transcript distances implemented in TranD A Nanni, J Titus-McQuillan, O Moskalenko, F Pardo-Palacios, Z Liu, ... bioRxiv, 2021.09. 28.462251, 2021 | 2 | 2021 |
| Variation in leaf transcriptome responses to elevated ozone corresponds with physiological sensitivity to ozone across maize inbred lines AV Nanni, AM Morse, JRB Newman, NE Choquette, JM Wedow, Z Liu, ... Genetics 221 (4), iyac080, 2022 | 1 | 2022 |
| Nucleotide-level distance metrics to quantify alternative splicing implemented in TranD A Nanni, J Titus-McQuillan, KS Bankole, F Pardo-Palacios, S Signor, ... Nucleic Acids Research, gkae056, 2024 | | 2024 |
| SQANTI3: curation of long-read transcriptomes for accurate identification of known and novel isoforms A Conesa, F Pardo-Palacios, A Arzalluz-Luque, L Kondratova, P Salguero, ... | | 2023 |
| Transcriptome Complexities Across Eukaryotes JE Titus-McQuillan, AV Nanni, LM McIntyre, RL Rogers arXiv preprint arXiv:2211.02546, 2022 | | 2022 |
| Altered Nucleoprotein Binding to Influenza Virus RNA Impacts Packaging Efficiency and Replication V Le Sage, JP Kanarek, E Nturibi, AV Nanni, DJ Snyder, VS Cooper, ... bioRxiv, 648261, 2019 | | 2019 |
