Hidden Markov models and their applications in biological sequence analysis BJ Yoon Current Genomics 10 (6), 402-415, 2009 | 522 | 2009 |
The role of signal-processing concepts in genomics and proteomics PP Vaidyanathan, BJ Yoon Journal of the Franklin Institute 341 (1-2), 111-135, 2004 | 231 | 2004 |
Accurate and reliable cancer classification based on probabilistic inference of pathway activity J Su, BJ Yoon, ER Dougherty PLOS ONE 4 (12), e8161, 2009 | 155 | 2009 |
Wavelet-based denoising by customized thresholding BJ Yoon, PP Vaidyanathan 2004 IEEE International Conference on Acoustics, Speech, and Signal …, 2004 | 135 | 2004 |
Digital filters for gene prediction applications PP Vaidyanathan, BJ Yoon Asilomar Conference on Signals, Systems, and Computers 1, 306-310, 2002 | 133 | 2002 |
Identification of differentially expressed miRNAs in chicken lung and trachea with avian influenza virus infection by a deep sequencing approach Y Wang, V Brahmakshatriya, H Zhu, B Lupiani, SM Reddy, BJ Yoon, ... BMC Genomics 10 (1), 1-20, 2009 | 132 | 2009 |
Robust adaptive beamforming with enhanced noise suppression I Tashev, A Acero, BJ Yoon US Patent 8,005,238, 2011 | 127 | 2011 |
SMETANA: accurate and scalable algorithm for probabilistic alignment of large-scale biological networks SME Sahraeian, BJ Yoon PLOS ONE 8 (7), e67995, 2013 | 120 | 2013 |
Gene and exon prediction using allpass-based filters PP Vaidyanathan, BJ Yoon Workshop on Genomic Signal Processing and Statistics 3, 2002 | 107 | 2002 |
Identification of diagnostic subnetwork markers for cancer in human protein-protein interaction network J Su, BJ Yoon, ER Dougherty BMC Bioinformatics 11 (6), 1-13, 2010 | 83 | 2010 |
Quantifying the objective cost of uncertainty in complex dynamical systems BJ Yoon, X Qian, ER Dougherty IEEE Transactions on Signal Processing 61 (9), 2256-2266, 2013 | 82 | 2013 |
Optimal experimental design for gene regulatory networks in the presence of uncertainty R Dehghannasiri, BJ Yoon, ER Dougherty IEEE/ACM Transactions on Computational Biology and Bioinformatics 12 (4 …, 2014 | 63 | 2014 |
A network synthesis model for generating protein interaction network families SME Sahraeian, BJ Yoon PLOS ONE 7 (8), e41474, 2012 | 62 | 2012 |
PicXAA: greedy probabilistic construction of maximum expected accuracy alignment of multiple sequences SME Sahraeian, BJ Yoon Nucleic Acids Research 38 (15), 4917-4928, 2010 | 55 | 2010 |
A novel low-complexity HMM similarity measure SME Sahraeian, BJ Yoon IEEE Signal Processing Letters 18 (2), 87-90, 2010 | 49 | 2010 |
Uncertainty-aware active learning for optimal Bayesian classifier G Zhao, E Dougherty, BJ Yoon, F Alexander, X Qian International conference on learning representations (ICLR 2021), 2021 | 41 | 2021 |
Querying pathways in protein interaction networks based on hidden Markov models X Qian, SH Sze, BJ Yoon Journal of Computational Biology 16 (2), 145-157, 2009 | 38 | 2009 |
Efficient experimental design for uncertainty reduction in gene regulatory networks R Dehghannasiri, BJ Yoon, ER Dougherty BMC Bioinformatics 16 (13), 1-18, 2015 | 37 | 2015 |
Enhanced stochastic optimization algorithm for finding effective multi-target therapeutics BJ Yoon BMC Bioinformatics 12 (1), 1-11, 2011 | 37 | 2011 |
Comparative analysis of biological networks: Hidden markov model and markov chain-based approach BJ Yoon, X Qian, SME Sahraeian IEEE Signal Processing Magazine 29 (1), 22-34, 2011 | 36 | 2011 |