| Custom DNA microarrays reveal diverse binding preferences of proteins and small molecules to thousands of G-quadruplexes S Ray, D Tillo, RE Boer, N Assad, M Barshai, G Wu, Y Orenstein, D Yang, ... ACS chemical biology 15 (4), 925-935, 2020 | 48 | 2020 |
| A fadD mutant of Vibrio cholerae Is Impaired in the Production of Virulence Factors and Membrane Localization of the Virulence Regulatory Protein TcpP S Ray, E Chatterjee, A Chatterjee, K Paul, R Chowdhury Infection and immunity 79 (1), 258-266, 2011 | 28 | 2011 |
| Fine tuning of virulence regulatory pathways in enteric bacteria in response to varying bile and oxygen concentrations in the gastrointestinal tract C Sengupta, S Ray, R Chowdhury Gut pathogens 6, 1-6, 2014 | 26 | 2014 |
| Custom G4 microarrays reveal selective G-quadruplex recognition of small molecule BMVC: a large-scale assessment of ligand binding selectivity G Wu, D Tillo, S Ray, TC Chang, JS Schneekloth Jr, C Vinson, D Yang Molecules 25 (15), 3465, 2020 | 19 | 2020 |
| The Epstein-Barr virus B-ZIP protein Zta recognizes specific DNA sequences containing 5-methylcytosine and 5-hydroxymethylcytosine D Tillo, S Ray, KS Syed, MR Gaylor, X He, J Wang, N Assad, SR Durell, ... Biochemistry 56 (47), 6200-6210, 2017 | 19 | 2017 |
| Replacing C189 in the bZIP domain of Zta with S, T, V, or A changes DNA binding specificity to four types of double-stranded DNA S Ray, D Tillo, N Assad, A Ufot, C Deppmann, SR Durell, A Porollo, ... Biochemical and biophysical research communications 501 (4), 905-912, 2018 | 6 | 2018 |
| The bZIP mutant CEBPB (V285A) has sequence specific DNA binding propensities similar to CREB1 S Ray, A Ufot, N Assad, J Singh, SR Durell, A Porollo, D Tillo, C Vinson Biochimica et Biophysica Acta (BBA)-Gene Regulatory Mechanisms 1862 (4), 486-492, 2019 | 5 | 2019 |
| REL Domain of NFATc2 Binding to Five Types of DNA Using Protein Binding Microarrays S Ray, D Tillo, SR Durell, S Khund-Sayeed, C Vinson ACS omega 6 (6), 4147-4154, 2021 | 2 | 2021 |
| BZIP dimers CREB1, AtF2, Zta, Atf3| cjun, and CFOs| cjun prefer to bind to some double-stranded DNA sequences containing 5-formylcytosine and 5-carboxylcytosine S Ray, D Tillo, A Ufot, N Assad, S Durell, C Vinson Biochemistry 59 (38), 3529-3540, 2020 | 2 | 2020 |
| Custom G4 DNA microarray can determine large-scale binding selectivity of small molecules and proteins to oncogene G-quadruplexes G Wu, L Chen, K Huseman, D Tillo, S Ray, TC Chang, JS Schneekloth, ... Cancer Research 83 (7_Supplement), 2756-2756, 2023 | | 2023 |
| Altering the Double-Stranded DNA Specificity of the bZIP Domain of Zta with Site-Directed Mutagenesis at N182 S Ray, D Tillo, N Assad, A Ufot, A Porollo, SR Durell, C Vinson ACS omega 7 (1), 129-139, 2021 | | 2021 |
| GABPα and CREB1 Binding to Double Nucleotide Polymorphisms of Their Consensus Motifs and Cooperative Binding to the Composite ETS⇔ CRE Motif (ACCGGAAGTGACGTCA) N Assad, D Tillo, S Ray, A Dzienny, PC FitzGerald, C Vinson ACS omega 4 (6), 9904-9910, 2019 | | 2019 |
| Bile dependent modulation of sensory transduction pathways in the Enteric bacterium vibrio cholerae S Ray Kolkata, 2015 | | 2015 |
| WITHDRAWN: Novel role of LeuO in HNS mediated silencing of the Vibrio cholerae virulence regulatory gene toxT. S Ray, C Sengupta, R Chowdhury The Journal of Biological Chemistry, jbc. M114. 593772-jbc. M114. 593772, 2014 | | 2014 |
