Local and systemic responses to SARS-CoV-2 infection in children and adults M Yoshida, KB Worlock, N Huang, RGH Lindeboom, CR Butler, ... Nature 602 (7896), 321-327, 2022 | 258 | 2022 |
Feedback loops of the mammalian circadian clock constitute repressilator JP Pett, A Korenčič, F Wesener, A Kramer, H Herzel PLoS computational biology 12 (12), e1005266, 2016 | 107 | 2016 |
Single-cell RNA sequencing reveals distinct tumor microenvironmental patterns in lung adenocarcinoma P Bischoff, A Trinks, B Obermayer, JP Pett, J Wiederspahn, F Uhlitz, ... Oncogene 40 (50), 6748-6758, 2021 | 101 | 2021 |
A spatially resolved atlas of the human lung characterizes a gland-associated immune niche E Madissoon, AJ Oliver, V Kleshchevnikov, A Wilbrey-Clark, K Polanski, ... Nature Genetics 55 (1), 66-77, 2023 | 96* | 2023 |
Circadian systems biology: When time matters L Fuhr, M Abreu, P Pett, A Relógio Computational and structural biotechnology journal 13, 417-426, 2015 | 92 | 2015 |
A human fetal lung cell atlas uncovers proximal-distal gradients of differentiation and key regulators of epithelial fates P He, K Lim, D Sun, JP Pett, Q Jeng, K Polanski, Z Dong, L Bolt, ... Cell 185 (25), 4841-4860. e25, 2022 | 88 | 2022 |
Spatially resolved multiomics of human cardiac niches K Kanemaru, J Cranley, D Muraro, AMA Miranda, SY Ho, A Wilbrey-Clark, ... Nature 619 (7971), 801-810, 2023 | 77 | 2023 |
Co-existing feedback loops generate tissue-specific circadian rhythms JP Pett, M Kondoff, G Bordyugov, A Kramer, H Herzel Life science alliance 1 (3), 2018 | 63 | 2018 |
Organoid modeling of human fetal lung alveolar development reveals mechanisms of cell fate patterning and neonatal respiratory disease K Lim, APA Donovan, W Tang, D Sun, P He, JP Pett, SA Teichmann, ... Cell Stem Cell 30 (1), 20-37. e9, 2023 | 36 | 2023 |
Weak coupling between intracellular feedback loops explains dissociation of clock gene dynamics C Schmal, D Ono, J Myung, JP Pett, S Honma, KI Honma, H Herzel, ... PLOS Computational Biology 15 (9), e1007330, 2019 | 20 | 2019 |
Human skeletal muscle aging atlas VR Kedlian, Y Wang, T Liu, X Chen, L Bolt, C Tudor, Z Shen, ES Fasouli, ... Nature aging, 1-18, 2024 | 14 | 2024 |
The single‐cell transcriptional landscape of lung carcinoid tumors P Bischoff, A Trinks, J Wiederspahn, B Obermayer, JP Pett, P Jurmeister, ... International Journal of Cancer 150 (12), 2058-2071, 2022 | 13 | 2022 |
Early human lung immune cell development and its role in epithelial cell fate JL Barnes, M Yoshida, P He, KB Worlock, RGH Lindeboom, C Suo, ... Science immunology 8 (90), eadf9988, 2023 | 11 | 2023 |
Analyses of circRNA Expression throughout the Light-Dark Cycle Reveal a Strong Regulation of Cdr1as, Associated with Light Entrainment in the SCN A Ivanov, D Mattei, K Radscheit, AC Compagnion, JP Pett, H Herzel, ... International Journal of Molecular Sciences 23 (20), 12347, 2022 | 5 | 2022 |
Multiomic analysis reveals developmental dynamics of the human heart in health and disease J Cranley, K Kanemaru, S Bayraktar, V Knight-Schrijver, JP Pett, ... bioRxiv, 2024.04. 29.591736, 2024 | 2 | 2024 |
Childhood-onset asthma is characterized by airway epithelial hillock-to-squamous differentiation in early life ETG Kersten, JP Pett, K Malmström, Y Chun, MR Jonker, A Wilbrey-Clark, ... bioRxiv, 2023.07. 31.549680, 2023 | 2 | 2023 |
SODAR: enabling, modeling, and managing multi-omics integration studies M Nieminen, O Stolpe, M Kuhring, J Weiner 3rd, P Pett, D Beule, ... bioRxiv, 2022.08. 19.504516, 2022 | 2* | 2022 |
Simple kinetic models in molecular chronobiology JP Pett, PO Westermark, H Herzel Circadian Clocks: Methods and Protocols, 87-100, 2021 | 2 | 2021 |
Influence of photic perturbations on circadian rhythms A Auconi, P Pett, E Klipp, H Herzel arXiv preprint arXiv:1903.10239, 2019 | 1 | 2019 |
A multiomic atlas of human early skeletal development K To, L Fei, JP Pett, K Roberts, K Polański, T Li, N Yayon, P He, C Xu, ... bioRxiv, 2024.07. 10.602965, 2024 | | 2024 |