Network medicine framework for identifying drug repurposing opportunities for COVID-19 D Morselli Gysi, I do Valle, M Zitnik, A Ameli, X Gan, O Varol, ... Proceedings of the National Academy of Sciences 118 (19), 2021 | 448 | 2021 |
Honey bee virus causes context-dependent changes in host social behavior AC Geffre, T Gernat, GP Harwood, BM Jones, D Morselli Gysi, ... Proceedings of the National Academy of Sciences 117 (19), 10406-10413, 2020 | 84 | 2020 |
A wealth of discovery built on the Human Genome Project—by the numbers AJ Gates, DM Gysi, M Kellis, AL Barabási Nature 590 (7845), 212-215, 2021 | 79 | 2021 |
wTO: an R package for computing weighted topological overlap and a consensus network with integrated visualization tool DM Gysi, A Voigt, TM Fragoso, E Almaas, K Nowick BMC bioinformatics 19, 1-16, 2018 | 63 | 2018 |
Improving the generalizability of protein-ligand binding predictions with AI-Bind A Chatterjee, R Walters, Z Shafi, OS Ahmed, M Sebek, D Gysi, R Yu, ... Nature communications 14 (1), 1989, 2023 | 50* | 2023 |
Combined experimental and system-level analyses reveal the complex regulatory network of miR-124 during human neurogenesis LK Kutsche, DM Gysi, J Fallmann, K Lenk, R Petri, A Swiersy, SD Klapper, ... Cell systems 7 (4), 438-452. e8, 2018 | 47 | 2018 |
Seasonal dynamics of pelagic mycoplanktonic communities: interplay of taxon abundance, temporal occurrence, and biotic interactions S Banos, DM Gysi, T Richter-Heitmann, FO Glöckner, M Boersma, ... Frontiers in microbiology 11, 1305, 2020 | 29 | 2020 |
Whole transcriptomic network analysis using co-expression differential network analysis (CoDiNA) D Morselli Gysi, T de Miranda Fragoso, F Zebardast, W Bertoli, ... PLoS One 15 (10), e0240523, 2020 | 28* | 2020 |
Measuring hand hygiene compliance rates at hospital entrances M Vaidotas, PKO Yokota, AR Marra, TZS Camargo, E da Silva Victor, ... American journal of infection control 43 (7), 694-696, 2015 | 28 | 2015 |
Identification of potent inhibitors of SARS-CoV-2 infection by combined pharmacological evaluation and cellular network prioritization JJ Patten, PT Keiser, D Morselli-Gysi, G Menichetti, H Mori, CJ Donahue, ... Iscience 25 (9), 2022 | 23* | 2022 |
Construction, comparison and evolution of networks in life sciences and other disciplines DM Gysi, K Nowick Journal of the Royal Society Interface 17 (166), 20190610, 2020 | 22 | 2020 |
Current and future directions in network biology M Zitnik, MM Li, A Wells, K Glass, DM Gysi, A Krishnan, TM Murali, ... arXiv preprint arXiv:2309.08478, 2023 | 9 | 2023 |
Noncoding RNAs improve the predictive power of network medicine DM Gysi, AL Barabasi Proceedings of the National Academy of Sciences, 2023 | 8 | 2023 |
Contrasting protist communities (Cercozoa: Rhizaria) in pristine and earthworm-invaded North American deciduous forests K Dumack, O Ferlian, D Morselli Gysi, F Degrune, RT Jauss, S Walden, ... Biological Invasions, 1-13, 2022 | 4 | 2022 |
Accelerated evolution of tissue-specific genes mediates divergence amidst gene flow in European green lizards SRR Kolora, DM Gysi, S Schaffer, A Grimm-Seyfarth, M Szabolcs, R Faria, ... Genome biology and evolution 13 (8), evab109, 2021 | 3 | 2021 |
The clinical trials puzzle: How network effects limit drug discovery K Vasan, DM Gysi, AL Barabási Iscience 26 (12), 2023 | 1 | 2023 |
The nosographic structure of posttraumatic stress symptoms across trauma types: An exploratory network analysis approach F Ferreira, D Gysi, D Castro, TB Ferreira Journal of Traumatic Stress 35 (4), 1115-1128, 2022 | 1 | 2022 |
Network Medicine Framework for Identifying Drug Repurposing Opportunities DM Gysi, AL Barábasi, IF Do Valle, O Varol, X Gan, A Ameli, J Loscalzo, ... US Patent App. 17/456,519, 2022 | 1 | 2022 |
Enhancing the accuracy of Network Medicine through understanding the impact of sample size in gene co-expression networks J Aguirre-Plans, B Chen, SD Ghiassian, A Jones, VR Akmaev, A Saleh, ... RExPO24 Conference, 2024 | | 2024 |
Centrality measures in psychological networks: A simulation study on identifying effective treatment targets D Castro, D Gysi, F Ferreira, F Ferreira-Santos, TB Ferreira Plos one 19 (2), e0297058, 2024 | | 2024 |