| Insights into the molecular mechanism of apoptosis induced by TNF-α in mouse epidermal JB6-derived RT-101 cells N Singh, N Khanna, H Sharma, S Kundu, S Azmi Biochemical and biophysical research communications 295 (1), 24-30, 2002 | 23 | 2002 |
| Distribution and prediction of catalytic domains in 2-oxoglutarate dependent dioxygenases S Kundu BMC research notes 5, 1-13, 2012 | 20 | 2012 |
| Unity in diversity, a systems approach to regulating plant cell physiology by 2-oxoglutarate-dependent dioxygenases S Kundu Frontiers in Plant Science 6, 98, 2015 | 12 | 2015 |
| Origin, evolution, and divergence of plant class C GH9 endoglucanases S Kundu, R Sharma BMC Evolutionary Biology 18, 1-19, 2018 | 11 | 2018 |
| In silico Identification and Taxonomic Distribution of Plant Class C GH9 Endoglucanases S Kundu, R Sharma Frontiers in Plant Science 7, 1185, 2016 | 9 | 2016 |
| Co-operative intermolecular kinetics of 2-oxoglutarate dependent dioxygenases may be essential for system-level regulation of plant cell physiology S Kundu Frontiers in Plant Science 6, 489, 2015 | 9 | 2015 |
| Stochastic modelling suggests that an elevated superoxide anion-hydrogen peroxide ratio can drive extravascular phagocyte transmigration by lamellipodium formation S Kundu Journal of Theoretical Biology 407, 143-154, 2016 | 7 | 2016 |
| Mathematical modeling and stochastic simulations suggest that low-affinity peptides can bisect MHC1-mediated export of high-affinity peptides into “early”-and “late”-phases S Kundu Heliyon 7 (7), 2021 | 6 | 2021 |
| Insights into the mechanism (s) of digestion of crystalline cellulose by plant class C GH9 endoglucanases S Kundu Journal of Molecular Modeling 25, 1-24, 2019 | 6 | 2019 |
| Modeling ligand-macromolecular interactions as eigenvalue-based transition-state dissociation constants may offer insights into biochemical function of the resulting complexes S Kundu Math. Biosci. Eng 19, 13252-13275, 2022 | 5 | 2022 |
| Mathematical basis of improved protein subfamily classification by a HMM-based sequence filter S Kundu Mathematical Biosciences 293, 75-80, 2017 | 4 | 2017 |
| ReDirection: an R-package to compute the probable dissociation constant for every reaction of a user-defined biochemical network S Kundu Frontiers in Molecular Biosciences 10, 1206502, 2023 | 3 | 2023 |
| Fe (2) OG: an integrated HMM profile-based web server to predict and analyze putative non-haem iron (II)-and 2-oxoglutarate-dependent dioxygenase function in protein sequences S Kundu BMC Research Notes 14, 1-7, 2021 | 3 | 2021 |
| A mathematically rigorous algorithm to define, compute and assess relevance of the probable dissociation constant for every reaction of a constrained biochemical network S Kundu | 2 | 2023 |
| TemporalGSSA: A numerically robust R-wrapper to facilitate computation of a metabolite-specific and simulation time-dependent trajectory from stochastic simulation algorithm … S Kundu Journal of Bioinformatics and Computational Biology 20 (04), 2250018, 2022 | 2 | 2022 |
| Mathematical model of a short translatable G-quadruplex and an assessment of its relevance to misfolding-induced proteostasis S Kundu Mathematical Biosciences and Engineering 17 (3), 2470-2493, 2020 | 2 | 2020 |
| A mathematically rigorous algorithm to define, compute and assess relevance of the probable dissociation constants in characterizing a biochemical network S Kundu Scientific Reports 14 (1), 3507, 2024 | 1 | 2024 |
| ReDirection: A numerically robust R-package to characterize every reaction of a user-defined biochemical network with the probable dissociation constant S Kundu bioRxiv, 2023.07. 12.548670, 2023 | 1 | 2023 |
| Mathematical Basis of Predicting Dominant Function in Protein Sequences by a Generic HMM–ANN Algorithm S Kundu Acta Biotheoretica 66 (2), 135-148, 2018 | 1 | 2018 |
| Gradient sensing in vectorial chemotaxis–a novel role for reactive oxygen species S Kundu, S Subodh Int. J. trends Med 1, 54-59, 2011 | 1 | 2011 |
