Circular chromosome conformation capture (4C) uncovers extensive networks of epigenetically regulated intra-and interchromosomal interactions Z Zhao, G Tavoosidana, M Sjölinder, A Göndör, P Mariano, S Wang, ... Nature genetics 38 (11), 1341-1347, 2006 | 1203 | 2006 |
Preferential associations between co-regulated genes reveal a transcriptional interactome in erythroid cells S Schoenfelder, T Sexton, L Chakalova, NF Cope, A Horton, S Andrews, ... Nature genetics 42 (1), 53-61, 2010 | 821 | 2010 |
CTCF binding at the H19 imprinting control region mediates maternally inherited higher-order chromatin conformation to restrict enhancer access to Igf2 S Kurukuti, VK Tiwari, G Tavoosidana, E Pugacheva, A Murrell, Z Zhao, ... Proceedings of the national academy of sciences 103 (28), 10684-10689, 2006 | 637 | 2006 |
Mutation of a single CTCF target site within the H19 imprinting control region leads to loss of Igf2 imprinting and complex patterns of de novo methylation upon maternal … V Pant, S Kurukuti, E Pugacheva, S Shamsuddin, P Mariano, R Renkawitz, ... Molecular and cellular biology, 2004 | 215 | 2004 |
Human tRNA genes function as chromatin insulators JR Raab, J Chiu, J Zhu, S Katzman, S Kurukuti, PA Wade, D Haussler, ... The EMBO journal 31 (2), 330-350, 2012 | 172 | 2012 |
CTCF binding and higher order chromatin structure of the H19 locus are maintained in mitotic chromatin LJ Burke, R Zhang, M Bartkuhn, VK Tiwari, G Tavoosidana, S Kurukuti, ... The EMBO journal 24 (18), 3291-3300, 2005 | 165 | 2005 |
The role of transcription factories in large-scale structure and dynamics of interphase chromatin T Sexton, D Umlauf, S Kurukuti, P Fraser Seminars in cell & developmental biology 18 (5), 691-697, 2007 | 81 | 2007 |
Evolutionarily conserved, DMRT1, encodes alternatively spliced transcripts and shows dimorphic expression during gonadal differentiation in the lizard, Calotes versicolor. RR K Sreenivasulu, S Ganesh Mech Dev. 119, S55-64, 2002 | 61* | 2002 |
Sensitive detection of chromatin coassociations using enhanced chromosome conformation capture on chip T Sexton, S Kurukuti, JA Mitchell, D Umlauf, T Nagano, P Fraser Nature protocols 7 (7), 1335-1350, 2012 | 52 | 2012 |
Chromatin looping defines expression of TAL1, its flanking genes, and regulation in T-ALL Y Zhou, S Kurukuti, P Saffrey, M Vukovic, AM Michie, R Strogantsev, ... Blood, The Journal of the American Society of Hematology 122 (26), 4199-4209, 2013 | 43 | 2013 |
Developmentally regulated higher-order chromatin interactions orchestrate B cell fate commitment R Boya, AD Yadavalli, S Nikhat, S Kurukuti, D Palakodeti, ... Nucleic acids research 45 (19), 11070-11087, 2017 | 24 | 2017 |
Comprehensive profiling of transcriptional networks specific for lactogenic differentiation of HC11 mammary epithelial stem-like cells TR Sornapudi, R Nayak, PK Guthikonda, AK Pasupulati, S Kethavath, ... Scientific Reports 8 (1), 11777, 2018 | 23 | 2018 |
System-wide coordinates of higher order functions in host-pathogen environment upon Mycobacterium tuberculosis infection PV Parvati Sai Arun, SK Miryala, A Rana, S Kurukuti, Y Akhter, ... Scientific Reports 8 (1), 5079, 2018 | 17 | 2018 |
Inhibitors of apoptosis protein antagonists (Smac mimetic compounds) control polarization of macrophages during microbial challenge and sterile inflammatory responses V Nadella, A Mohanty, L Sharma, S Yellaboina, HJ Mollenkopf, ... Frontiers in immunology 8, 1792, 2018 | 17 | 2018 |
Biased visibility in Hi-C datasets marks dynamically regulated condensed and decondensed chromatin states genome-wide KR Chandradoss, PK Guthikonda, S Kethavath, M Dass, H Singh, ... BMC genomics 21, 1-15, 2020 | 12 | 2020 |
Involvement of androgen receptor gene in male gonad differentiation in Indian garden lizard, Calotes versicolor A Chakraborty, K Sreenivasulu, R Raman Molecular and cellular endocrinology 303 (1-2), 100-106, 2009 | 12 | 2009 |
Podocyte derived TNF‐α mediates monocyte differentiation and contributes to glomerular injury R Nishad, D Mukhi, S Kethavath, S Raviraj, ASV Paturi, M Motrapu, ... The FASEB Journal 36 (12), e22622, 2022 | 10 | 2022 |
CTCF-mediated genome architecture regulates the dosage of mitotically stable mono-allelic expression of autosomal genes KR Chandradoss, B Chawla, S Dhuppar, R Nayak, R Ramachandran, ... Cell Reports 33 (4), 2020 | 5 | 2020 |
RNA sequencing of murine mammary epithelial stem-like cells (HC11) undergoing lactogenic differentiation and its comparison with embryonic stem cells TR Sornapudi, R Nayak, PK Guthikonda, S Kethavath, S Yellaboina, ... BMC Research Notes 11, 1-3, 2018 | 1 | 2018 |
Polymorphic dynamics of ribosomal proteins gene expression during somatic cell reprogramming and their differentiation in to specialized cells-types PK Guthikonda, SP Bharathan, J Rayabaram, TR Sornapudi, ... bioRxiv, 114868, 2017 | 1 | 2017 |