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M. Azim Ansari
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Broad and strong memory CD4+ and CD8+ T cells induced by SARS-CoV-2 in UK convalescent individuals following COVID-19
Y Peng, AJ Mentzer, G Liu, X Yao, Z Yin, D Dong, W Dejnirattisai, ...
Nature Immunology, 2020
12342020
SARS-CoV-2 Omicron is an immune escape variant with an altered cell entry pathway
BJ Willett, J Grove, OA MacLean, C Wilkie, G De Lorenzo, W Furnon, ...
Nature microbiology 7 (8), 1161-1179, 2022
4542022
SARS-CoV-2 within-host diversity and transmission
KA Lythgoe, M Hall, L Ferretti, M de Cesare, G MacIntyre-Cockett, ...
Science, 2021
365*2021
Immunogenicity of standard and extended dosing intervals of BNT162b2 mRNA vaccine
RP Payne, S Longet, JA Austin, DT Skelly, W Dejnirattisai, S Adele, ...
Cell, 2021
2802021
Safety and immunogenicity of the ChAdox1 nCoV-19 (AZD1222) vaccine against SARS-CoV-2 in HIV infection
J Frater, K Ewer, A Ogbe, M Pace, S Adele, E Adland, J Alagaratnam, ...
Lancet HIV, 2021
2332021
Microevolutionary analysis of Clostridium difficile genomes to investigate transmission
X Didelot, DW Eyre, M Cule, CL Ip, MA Ansari, D Griffiths, A Vaughan, ...
Genome Biology 13 (12), R118, 2012
2332012
A blood atlas of COVID-19 defines hallmarks of disease severity and specificity
COMBATC Consortium
Cell 185 (5), 916-938.e58, 2022
1792022
T-cell and antibody responses to first BNT162b2 vaccine dose in previously infected and SARS-CoV-2-naive UK health-care workers: a multicentre prospective cohort study
A Angyal, S Longet, SC Moore, RP Payne, A Harding, T Tipton, ...
The Lancet Microbe 3 (1), e21-e31, 2022
1762022
Comparison of next-generation sequencing technologies for comprehensive assessment of full-length hepatitis C viral genomes
E Thomson, CLC Ip, A Badhan, MT Christiansen, W Adamson, MA Ansari, ...
Journal of clinical microbiology 54 (10), 2470-2484, 2016
1332016
Genome-to-genome analysis highlights the effect of the human innate and adaptive immune systems on the hepatitis C virus
MA Ansari, V Pedergnana, C LC Ip, A Magri, A Von Delft, D Bonsall, ...
Nature genetics 49 (5), 666-673, 2017
1262017
T cell assays differentiate clinical and subclinical SARS-CoV-2 infections from cross-reactive antiviral responses
A Ogbe, B Kronsteiner, DT Skelly, M Pace, A Brown, E Adland, K Adair, ...
Nature Communications 12 (1), 1-14, 2021
1212021
Insights from deep sequencing of the HBV genome—unique, tiny, and misunderstood
AL McNaughton, V D'Arienzo, MA Ansari, SF Lumley, M Littlejohn, ...
Gastroenterology, 2018
1172018
Genomic epidemiology reconstructs the introduction and spread of Zika virus in Central America and Mexico
J Thézé, T Li, L du Plessis, J Bouquet, MUG Kraemer, S Somasekar, G Yu, ...
Cell host & microbe, 2018
1142018
Recombinational switching of the Clostridium difficile S-layer and a novel glycosylation gene cluster revealed by large-scale whole-genome sequencing
KE Dingle, X Didelot, MA Ansari, DW Eyre, A Vaughan, D Griffiths, CLC Ip, ...
Journal of Infectious Diseases 207 (4), 675–686, 2013
1062013
Illumina and Nanopore methods for whole genome sequencing of hepatitis B virus (HBV)
AL McNaughton, HE Roberts, D Bonsall, M de Cesare, J Mokaya, ...
Scientific Reports 9 (1), 7081, 2019
1022019
Evolutionary dynamics of Enterococcus faecium reveals complex genomic relationships between isolates with independent emergence of vancomycin resistance.
SJ van Hal, CLC Ip, MA Ansari, DJ Wilson, B Espedido, SO Jensen, ...
Microbial Genomics, 2015
962015
The impact of pre-existing cross-reactive immunity on SARS-CoV-2 infection and vaccine responses
S Murray, susanna dunachie, J Frater, A Ogbe, MA Ansari, P Klenerman, ...
Nature Reviews Immunology, 2022
872022
Resistance analysis of genotype 3 hepatitis C virus indicates subtypes inherently resistant to nonstructural protein 5A inhibitors
D Smith, A Magri, D Bonsall, CLC Ip, A Trebes, A Brown, P Piazza, ...
Hepatology 69 (5), 1861-1872, 2019
792019
ve-SEQ: Robust, unbiased enrichment for streamlined detection and whole-genome sequencing of HCV and other highly diverse pathogens
D Bonsall, MA Ansari, C Ip, A Trebes, A Brown, P Klenerman, D Buck, ...
F1000Research 4 (1062), 2015
752015
Efficient inference of recombination hot regions in bacterial genomes
K Yahara, X Didelot, MA Ansari, SK Sheppard, D Falush
Molecular biology and evolution 31 (6), 1593-1605, 2014
752014
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