Integrated proteogenomic characterization of clear cell renal cell carcinoma DJ Clark, SM Dhanasekaran, F Petralia, J Pan, X Song, Y Hu, ... Cell 179 (4), 964-983. e31, 2019 | 515 | 2019 |
Proteogenomic characterization of pancreatic ductal adenocarcinoma L Cao, C Huang, DC Zhou, Y Hu, TM Lih, SR Savage, K Krug, DJ Clark, ... Cell 184 (19), 5031-5052. e26, 2021 | 295 | 2021 |
Metabolite identification for mass spectrometry-based metabolomics using multiple types of correlated ion information KS Lynn, ML Cheng, YR Chen, C Hsu, A Chen, TM Lih, HY Chang, ... Analytical chemistry 87 (4), 2143-2151, 2015 | 82 | 2015 |
MAGIC: An Automated N-Linked Glycoprotein Identification Tool Using a Y1-Ion Pattern Matching Algorithm and in Silico MS2 Approach KS Lynn, CC Chen, TM Lih, CW Cheng, WC Su, CH Chang, CY Cheng, ... Analytical chemistry 87 (4), 2466-2473, 2015 | 76 | 2015 |
Histopathologic and proteogenomic heterogeneity reveals features of clear cell renal cell carcinoma aggressiveness Y Li, TSM Lih, SM Dhanasekaran, R Mannan, L Chen, M Cieslik, Y Wu, ... Cancer cell 41 (1), 139-163. e17, 2023 | 67 | 2023 |
Glycans, Glycosite, and Intact Glycopeptide Analysis of N-Linked Glycoproteins Using Liquid Handling Systems SY Chen, M Dong, G Yang, Y Zhou, DJ Clark, TM Lih, M Schnaubelt, Z Liu, ... Analytical chemistry 92 (2), 1680-1686, 2019 | 39 | 2019 |
A Comprehensive Analysis of FUT8 Overexpressing Prostate Cancer Cells Reveals the Role of EGFR in Castration Resistance N Höti, TS Lih, J Pan, Y Zhou, G Yang, A Deng, L Chen, M Dong, ... Cancers 12 (2), 468, 2020 | 35 | 2020 |
Proteomic signatures of 16 major types of human cancer reveal universal and cancer-type-specific proteins for the identification of potential therapeutic targets Y Zhou, TM Lih, J Pan, N Höti, M Dong, L Cao, Y Hu, KC Cho, SY Chen, ... Journal of hematology & oncology 13 (1), 1-15, 2020 | 29 | 2020 |
An integrated workflow for global, glyco-, and phospho-proteomic analysis of tumor tissues Y Zhou, TSM Lih, G Yang, SY Chen, L Chen, DW Chan, H Zhang, QK Li Analytical chemistry 92 (2), 1842-1849, 2019 | 27 | 2019 |
Urinary glycoproteins associated with aggressive prostate cancer M Dong, TM Lih, SY Chen, KC Cho, RV Eguez, N Höti, Y Zhou, W Yang, ... Theranostics 10 (26), 11892, 2020 | 26 | 2020 |
iMet-Q: a user-friendly tool for label-free metabolomics quantitation using dynamic peak-width determination HY Chang, CT Chen, TM Lih, KS Lynn, CG Juo, WL Hsu, TY Sung PloS one 11 (1), e0146112, 2016 | 26 | 2016 |
Development of a glycoproteomic strategy to detect more aggressive prostate cancer using lectin-immunoassays for serum fucosylated PSA C Wang, N Höti, TSM Lih, LJ Sokoll, R Zhang, Z Zhang, H Zhang, ... Clinical Proteomics 16, 1-8, 2019 | 25 | 2019 |
Data-Independent Acquisition-Based Mass Spectrometry (DIA-MS) for Quantitative Analysis of Intact N-Linked Glycopeptides M Dong, TSM Lih, M Ao, Y Hu, SY Chen, RV Eguez, H Zhang Analytical chemistry 93 (41), 13774-13782, 2021 | 21 | 2021 |
Characterization of core fucosylation via sequential enzymatic treatments of intact glycopeptides and mass spectrometry analysis L Cao, TM Lih, Y Hu, M Schnaubelt, SY Chen, Y Zhou, C Guo, M Dong, ... Nature communications 13 (1), 3910, 2022 | 20 | 2022 |
MAGIC-web: a platform for untargeted and targeted N-linked glycoprotein identification TM Lih, WK Choong, CC Chen, CW Cheng, HN Lin, CT Chen, HY Chang, ... Nucleic acids research 44 (W1), W575-W580, 2016 | 15 | 2016 |
Development of Parallel Reaction Monitoring Assays for the Detection of Aggressive Prostate Cancer Using Urinary Glycoproteins M Dong, TSM Lih, N Hoti, SY Chen, S Ponce, A Partin, H Zhang Journal of proteome research 20 (7), 3590-3599, 2021 | 14 | 2021 |
Optimized data-independent acquisition approach for proteomic analysis at single-cell level Y Wang, TSM Lih, L Chen, Y Xu, MD Kuczler, L Cao, KJ Pienta, ... Clinical Proteomics 19 (1), 24, 2022 | 12 | 2022 |
Improving the detection of aggressive prostate cancer using immunohistochemical staining of protein marker panels QK Li, TSM Lih, Y Wang, Y Hu, N Höti, DW Chan, H Zhang American journal of cancer research 12 (3), 1323, 2022 | 10 | 2022 |
Proteomic characterization of primary and metastatic prostate cancer reveals reduced proteinase activity in aggressive tumors QK Li, J Chen, Y Hu, N Höti, TSM Lih, SN Thomas, L Chen, S Roy, ... Scientific reports 11 (1), 18936, 2021 | 9 | 2021 |
Correction: E-cadherin interacts with EGFR resulting in hyper-activation of ERK in multiple models of breast cancer GC Russo, AJ Crawford, D Clark, J Cui, R Carney, MN Karl, B Su, ... Oncogene 43 (19), 1488-1488, 2024 | 8 | 2024 |