CellMarker: a manually curated resource of cell markers in human and mouse X Zhang, Y Lan, J Xu, F Quan, E Zhao, C Deng, T Luo, L Xu, G Liao, ... Nucleic acids research 47 (D1), D721-D728, 2019 | 1004 | 2019 |
CancerSEA: a cancer single-cell state atlas H Yuan, M Yan, G Zhang, W Liu, C Deng, G Liao, L Xu, T Luo, H Yan, ... Nucleic acids research 47 (D1), D900-D908, 2019 | 553 | 2019 |
TIP: a web server for resolving tumor immunophenotype profiling L Xu, C Deng, B Pang, X Zhang, W Liu, G Liao, H Yuan, P Cheng, F Li, ... Cancer research 78 (23), 6575-6580, 2018 | 413 | 2018 |
MiRNA–miRNA synergistic network: construction via co-regulating functional modules and disease miRNA topological features J Xu, CX Li, YS Li, JY Lv, Y Ma, TT Shao, LD Xu, YY Wang, L Du, ... Nucleic acids research 39 (3), 825-836, 2011 | 312 | 2011 |
Database resources of the national genomics data center, China national center for bioinformation in 2022 Nucleic Acids Research 50 (D1), D27-D38, 2022 | 302 | 2022 |
Database resources of the national genomics data center, China national center for bioinformation in 2023 Nucleic acids research 51 (D1), D18-D28, 2023 | 220 | 2023 |
Prioritizing candidate disease miRNAs by topological features in the miRNA target–dysregulated network: Case study of prostate cancer J Xu, CX Li, JY Lv, YS Li, Y Xiao, TT Shao, X Huo, X Li, Y Zou, QL Han, ... Molecular cancer therapeutics 10 (10), 1857-1866, 2011 | 216 | 2011 |
A comprehensive overview of lncRNA annotation resources J Xu, J Bai, X Zhang, Y Lv, Y Gong, L Liu, H Zhao, F Yu, Y Ping, G Zhang, ... Briefings in bioinformatics 18 (2), 236-249, 2017 | 160 | 2017 |
Effect of statin therapy on the progression of coronary atherosclerosis J Tian, X Gu, Y Sun, X Ban, Y Xiao, S Hu, B Yu BMC cardiovascular disorders 12, 1-11, 2012 | 110 | 2012 |
The DNA methylome and transcriptome of different brain regions in schizophrenia and bipolar disorder Y Xiao, C Camarillo, Y Ping, TB Arana, H Zhao, PM Thompson, C Xu, ... PloS one 9 (4), e95875, 2014 | 107 | 2014 |
LncTarD: A manually-curated database of experimentally-supported functional lncRNA–target regulations in human diseases H Zhao, J Shi, Y Zhang, A Xie, L Yu, C Zhang, J Lei, H Xu, Z Leng, T Li, ... Nucleic acids research 48 (D1), D118-D126, 2020 | 103 | 2020 |
Discovery of time-delayed gene regulatory networks based on temporal gene expression profiling X Li, S Rao, W Jiang, C Li, Y Xiao, Z Guo, Q Zhang, L Wang, L Du, J Li, ... BMC bioinformatics 7, 1-20, 2006 | 102 | 2006 |
Identification of cancer-related lncRNAs through integrating genome, regulome and transcriptome features T Zhao, J Xu, L Liu, J Bai, C Xu, Y Xiao, X Li, L Zhang Molecular BioSystems 11 (1), 126-136, 2015 | 100 | 2015 |
Identifying ultrasound and clinical features of breast cancer molecular subtypes by ensemble decision L Zhang, J Li, Y Xiao, H Cui, G Du, Y Wang, Z Li, T Wu, X Li, J Tian Scientific reports 5 (1), 11085, 2015 | 94 | 2015 |
DiseaseEnhancer: a resource of human disease-associated enhancer catalog G Zhang, J Shi, S Zhu, Y Lan, L Xu, H Yuan, G Liao, X Liu, Y Zhang, ... Nucleic acids research 46 (D1), D78-D84, 2018 | 82 | 2018 |
Topologically inferring risk-active pathways toward precise cancer classification by directed random walk W Liu, C Li, Y Xu, H Yang, Q Yao, J Han, D Shang, C Zhang, F Su, X Li, ... Bioinformatics 29 (17), 2169-2177, 2013 | 78 | 2013 |
Breast cancer prognosis signature: linking risk stratification to disease subtypes F Yu, F Quan, J Xu, Y Zhang, Y Xie, J Zhang, Y Lan, H Yuan, H Zhang, ... Briefings in bioinformatics 20 (6), 2130-2140, 2019 | 76 | 2019 |
Identification of a five‐lncRNA signature for predicting the risk of tumor recurrence in patients with breast cancer J Li, W Wang, P Xia, L Wan, L Zhang, L Yu, L Wang, X Chen, Y Xiao, C Xu International journal of cancer 143 (9), 2150-2160, 2018 | 74 | 2018 |
Systematic identification of lincRNA‐based prognostic biomarkers by integrating lincRNA expression and copy number variation in lung adenocarcinoma L Wang, H Zhao, Y Xu, J Li, C Deng, Y Deng, J Bai, X Li, Y Xiao, Y Zhang International journal of cancer 144 (7), 1723-1734, 2019 | 68 | 2019 |
Prioritizing candidate disease miRNAs by integrating phenotype associations of multiple diseases with matched miRNA and mRNA expression profiles C Xu, Y Ping, X Li, H Zhao, L Wang, H Fan, Y Xiao, X Li Molecular biosystems 10 (11), 2800-2809, 2014 | 68 | 2014 |