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Gloria Sheynkman
Gloria Sheynkman
Assistant Professor, University of Virginia School of Medicine
在 virginia.edu 的电子邮件经过验证 - 首页
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引用次数
引用次数
年份
A reference map of the human binary protein interactome
K Luck, DK Kim, L Lambourne, K Spirohn, BE Begg, W Bian, R Brignall, ...
Nature 580 (7803), 402-408, 2020
9662020
Widespread expansion of protein interaction capabilities by alternative splicing
X Yang, J Coulombe-Huntington, S Kang, GM Sheynkman, T Hao, ...
Cell 164 (4), 805-817, 2016
5552016
Proteome-scale human interactomics
K Luck, GM Sheynkman, I Zhang, M Vidal
Trends in biochemical sciences 42 (5), 342-354, 2017
1582017
Discovery and mass spectrometric analysis of novel splice-junction peptides using RNA-Seq
GM Sheynkman, MR Shortreed, BL Frey, LM Smith
Molecular & Cellular Proteomics 12 (8), 2341-2353, 2013
1472013
Proteogenomics: integrating next-generation sequencing and mass spectrometry to characterize human proteomic variation
GM Sheynkman, MR Shortreed, AJ Cesnik, LM Smith
Annual review of analytical chemistry 9 (1), 521-545, 2016
1162016
Full-length mRNA sequencing uncovers a widespread coupling between transcription initiation and mRNA processing
SY Anvar, G Allard, E Tseng, GM Sheynkman, E de Klerk, M Vermaat, ...
Genome biology 19, 1-18, 2018
1042018
Using Galaxy-P to leverage RNA-Seq for the discovery of novel protein variations
GM Sheynkman, JE Johnson, PD Jagtap, MR Shortreed, G Onsongo, ...
BMC genomics 15, 1-9, 2014
1002014
Full-length transcript sequencing of human and mouse cerebral cortex identifies widespread isoform diversity and alternative splicing
SK Leung, AR Jeffries, I Castanho, BT Jordan, K Moore, JP Davies, ...
Cell reports 37 (7), 2021
942021
Large-scale mass spectrometric detection of variant peptides resulting from nonsynonymous nucleotide differences
GM Sheynkman, MR Shortreed, BL Frey, M Scalf, LM Smith
Journal of proteome research 13 (1), 228-240, 2014
942014
Global identification of protein post-translational modifications in a single-pass database search
MR Shortreed, CD Wenger, BL Frey, GM Sheynkman, M Scalf, MP Keller, ...
Journal of proteome research 14 (11), 4714-4720, 2015
592015
Alkylating tryptic peptides to enhance electrospray ionization mass spectrometry analysis
SE Kulevich, BL Frey, G Kreitinger, LM Smith
Analytical chemistry 82 (24), 10135-10142, 2010
502010
Metabolism of a highly selective gelatinase inhibitor generates active metabolite
M Lee, A Villegas‐Estrada, G Celenza, B Boggess, M Toth, G Kreitinger, ...
Chemical Biology & Drug Design 70 (5), 371-382, 2007
472007
Sequence-specific capture of protein-DNA complexes for mass spectrometric protein identification
CH Wu, S Chen, MR Shortreed, GM Kreitinger, Y Yuan, BL Frey, Y Zhang, ...
PloS one 6 (10), e26217, 2011
462011
Enhanced protein isoform characterization through long-read proteogenomics
RM Miller, BT Jordan, MM Mehlferber, ED Jeffery, C Chatzipantsiou, ...
Genome biology 23 (1), 69, 2022
432022
Absolute quantification of prion protein (90–231) using stable isotope-labeled chymotryptic peptide standards in a LC-MRM AQUA workflow
R Sturm, G Sheynkman, C Booth, LM Smith, JA Pedersen, L Li
Journal of the American Society for Mass Spectrometry 23 (9), 1522-1533, 2012
392012
Systematic assessment of long-read RNA-seq methods for transcript identification and quantification
FJ Pardo-Palacios, D Wang, F Reese, M Diekhans, S Carbonell-Sala, ...
Nature methods, 1-15, 2024
372024
Human proteomic variation revealed by combining RNA-Seq proteogenomics and global post-translational modification (G-PTM) search strategy
AJ Cesnik, MR Shortreed, GM Sheynkman, BL Frey, LM Smith
Journal of proteome research 15 (3), 800-808, 2016
372016
Endothelial cell cycle state determines propensity for arterial-venous fate
NW Chavkin, G Genet, M Poulet, ED Jeffery, C Marziano, N Genet, ...
Nature communications 13 (1), 5891, 2022
362022
sapFinder: an R/Bioconductor package for detection of variant peptides in shotgun proteomics experiments
B Wen, S Xu, GM Sheynkman, Q Feng, L Lin, Q Wang, X Xu, J Wang, ...
Bioinformatics 30 (21), 3136-3138, 2014
332014
ORF Capture-Seq as a versatile method for targeted identification of full-length isoforms
GM Sheynkman, KS Tuttle, F Laval, E Tseng, JG Underwood, L Yu, ...
Nature communications 11 (1), 2326, 2020
292020
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