Genome-level transcription data of Yersinia pestis analyzed with a New metabolic constraint-based approach A Navid, E Almaas BMC systems biology 6, 1-18, 2012 | 87 | 2012 |
Do genome‐scale models need exact solvers or clearer standards? A Ebrahim, E Almaas, E Bauer, A Bordbar, AP Burgard, RL Chang, ... Molecular systems biology 11 (10), 831, 2015 | 64 | 2015 |
Combining multiple functional annotation tools increases coverage of metabolic annotation M Griesemer, JA Kimbrel, CE Zhou, A Navid, P D’haeseleer BMC genomics 19, 1-11, 2018 | 50 | 2018 |
Genome-scale reconstruction of the metabolic network in Yersinia pestis, strain 91001 A Navid, E Almaas Molecular bioSystems 5 (4), 368-375, 2009 | 46 | 2009 |
Syntrophic metabolism of a co-culture containing Clostridium cellulolyticum and Rhodopseudomonas palustris for hydrogen production Y Jiao, A Navid, BJ Stewart, JB McKinlay, MP Thelen, J Pett-Ridge international journal of hydrogen energy 37 (16), 11719-11726, 2012 | 35 | 2012 |
D‐Lactate production as a function of glucose metabolism in Saccharomyces cerevisiae BJ Stewart, A Navid, KS Kulp, JLS Knaack, G Bench Yeast 30 (2), 81-91, 2013 | 28 | 2013 |
Rapid countermeasure discovery against Francisella tularensis based on a metabolic network reconstruction S Chaudhury, MDM Abdulhameed, N Singh, GJ Tawa, PM D’haeseleer, ... PLoS One 8 (5), e63369, 2013 | 26 | 2013 |
The Karyote® Physico-Chemical Genomic, Proteomic, Metabolic Cell Modeling System P Ortoleva, E Berry, Y Brun, J Fan, M Fontus, K Hubbard, K Jaqaman, ... OMICS A Journal of Integrative Biology 7 (3), 269-283, 2003 | 25 | 2003 |
Collagen turnover in relation to risk factors and hemodynamics in human intracranial aneurysms KAM Hackenberg, H Rajabzadeh-Oghaz, R Dreier, BA Buchholz, A Navid, ... Stroke 51 (5), 1624-1628, 2020 | 23 | 2020 |
System-level analysis of metabolic trade-offs during anaerobic photoheterotrophic growth in Rhodopseudomonas palustris A Navid, Y Jiao, SE Wong, J Pett-Ridge BMC bioinformatics 20, 1-16, 2019 | 22 | 2019 |
Yeast dynamic metabolic flux measurement in nutrient-rich media by HPLC and accelerator mass spectrometry BJ Stewart, A Navid, KW Turteltaub, G Bench Analytical chemistry 82 (23), 9812-9817, 2010 | 19 | 2010 |
Simulated complex dynamics of glycolysis in the protozoan parasite Trypanosoma brucei A Navid, PJ Ortoleva Journal of Theoretical Biology 228 (4), 449-458, 2004 | 16 | 2004 |
Applications of system-level models of metabolism for analysis of bacterial physiology and identification of new drug targets A Navid Briefings in functional genomics 10 (6), 354-364, 2011 | 15 | 2011 |
A proposed role for all-trans retinal in regulation of rhodopsin regeneration in human rods A Navid, SC Nicholas, RD Hamer Vision research 46 (27), 4449-4463, 2006 | 11 | 2006 |
Quantitative In Silico analysis of transient metabolism of acetaminophen and associated causes of hepatotoxicity in humans A Navid, DM Ng, BJ Stewart, SE Wong, FC Lightstone In Silico Pharmacology 1, 1-12, 2013 | 10 | 2013 |
UV‐vis and binding studies of cobalt tetrasulfophthalocyanine–thiolate complexes as intermediates of the Merox process A Navid, EM Tyapochkin, CJ Archer, EI Kozliak Journal of Porphyrins and Phthalocyanines 3 (6‐7), 654-666, 1999 | 9 | 1999 |
Application of a physiologically based pharmacokinetic model to study theophylline metabolism and its interactions with ciprofloxacin and caffeine A Navid, DM Ng, SE Wong, FC Lightstone CPT: Pharmacometrics & Systems Pharmacology 5 (2), 74-81, 2016 | 8 | 2016 |
Microbial systems biology: methods and protocols J Pett-Ridge, PK Weber, A Navid Humana, Totowa, NJ, 2012 | 7 | 2012 |
Systems biology of microbial communities A Navid, CM Ghim, AT Fenley, S Yoon, S Lee, E Almaas Systems Biology, 469-494, 2009 | 6 | 2009 |
Electrogenetic signaling and information propagation for controlling microbial consortia via programmed lysis E VanArsdale, A Navid, MJ Chu, TM Halvorsen, GF Payne, Y Jiao, ... Biotechnology and Bioengineering 120 (5), 1366-1381, 2023 | 5 | 2023 |