Transgenerational adaptation of Arabidopsis to stress requires DNA methylation and the function of Dicer-like proteins A Boyko, T Blevins, Y Yao, A Golubov, A Bilichak, Y Ilnytskyy, J Hollunder, ... PLoS One 5 (3), e9514, 2010 | 515 | 2010 |
Targeted interactomics reveals a complex core cell cycle machinery in Arabidopsis thaliana J Van Leene, J Hollunder, D Eeckhout, G Persiau, E Van De Slijke, ... Molecular systems biology 6 (1), 397, 2010 | 381 | 2010 |
Post-transcriptional expression regulation in the yeast Saccharomyces cerevisiae on a genomic scale A Beyer, J Hollunder, HP Nasheuer, T Wilhelm Molecular & cellular proteomics 3 (11), 1083-1092, 2004 | 281 | 2004 |
The progeny of Arabidopsis thaliana plants exposed to salt exhibit changes in DNA methylation, histone modifications and gene expression A Bilichak, Y Ilnystkyy, J Hollunder, I Kovalchuk PloS one 7 (1), e30515, 2012 | 220 | 2012 |
Functional modules in the Arabidopsis core cell cycle binary protein-protein interaction network J Boruc, H Van den Daele, J Hollunder, S Rombauts, E Mylle, P Hilson Plant Cell 22 (4), 1264-1280, 2010 | 197 | 2010 |
Integrated assessment and prediction of transcription factor binding A Beyer, C Workman, J Hollunder, D Radke, U Möller, T Wilhelm, T Ideker PLoS computational biology 2 (6), e70, 2006 | 111 | 2006 |
CORNET 2.0: integrating plant coexpression, protein–protein interactions, regulatory interactions, gene associations and functional annotations S De Bodt, J Hollunder, H Nelissen, N Meulemeester, D Inzé New Phytologist 195 (3), 707-720, 2012 | 110 | 2012 |
CORNET: a user-friendly tool for data mining and integration S De Bodt, D Carvajal, J Hollunder, J Van den Cruyce, S Movahedi, ... Plant physiology 152 (3), 1167-1179, 2010 | 96 | 2010 |
Specific impact of tobamovirus infection on the Arabidopsis small RNA profile Q Hu, J Hollunder, A Niehl, CJ Kørner, D Gereige, D Windels, A Arnold, ... PloS one 6 (5), e19549, 2011 | 75 | 2011 |
Information theoretic description of networks T Wilhelm, J Hollunder Physica A: Statistical Mechanics and its Applications 385 (1), 385-396, 2007 | 65 | 2007 |
Predicting Gene Function from Uncontrolled Expression Variation among Individual Wild-Type Arabidopsis Plants R Bhosale, JB Jewell, J Hollunder, AJK Koo, M Vuylsteke, T Michoel, ... The Plant Cell 25 (8), 2865-2877, 2013 | 54 | 2013 |
Comparative transcriptomics as a tool for the identification of root branching genes in maize L Jansen, J Hollunder, I Roberts, C Forestan, P Fonteyne, ... Plant Biotechnology Journal 11 (9), 1092-1102, 2013 | 46 | 2013 |
Identification and characterization of protein subcomplexes in yeast J Hollunder, A Beyer, T Wilhelm Proteomics 5 (8), 2082-2089, 2005 | 30 | 2005 |
Common patterns in type II restriction enzyme binding sites S Nikolajewa, A Beyer, M Friedel, J Hollunder, T Wilhelm Nucleic acids research 33 (8), 2726-2733, 2005 | 20 | 2005 |
DASS: efficient discovery and p-value calculation of substructures in unordered data J Hollunder, M Friedel, A Beyer, CT Workman, T Wilhelm Bioinformatics 23 (1), 77-83, 2007 | 15 | 2007 |
Protein subcomplexes—molecular machines with highly specialized functions J Hollunder, A Beyer, T Wilhelm IEEE transactions on nanobioscience 6 (1), 86-93, 2007 | 7 | 2007 |
DASS-GUI: a user interface for identification and analysis of significant patterns in non-sequential data J Hollunder, M Friedel, M Kuiper, T Wilhelm Bioinformatics 26 (7), 987-989, 2010 | 5 | 2010 |
A Blueprint for Semantically Lifting Field Trial Data: Enabling Exploration using Knowledge Graphs. D Burkow, J Hollunder, J Heinrich, F Abdallah, MA Rojas-Macias, ... SWAT4HCLS, 64-73, 2019 | 3 | 2019 |
Flexible network reconstruction from relational databases with Cytoscape and CytoSQL K Laukens, J Hollunder, TH Dang, G De Jaeger, M Kuiper, E Witters, ... BMC bioinformatics 11, 1-6, 2010 | 2 | 2010 |
Exploiting combinatorial complexity—searching for new functional entities in the cell J Hollunder, A Beyer, T Wilhelm Proceedings of Foundation of System Biology in Engineering (FOSBE 2005), 363-366, 2005 | 1 | 2005 |