Statistical analysis of spatial expression patterns for spatially resolved transcriptomic studies S Sun, J Zhu, X Zhou Nature methods 17 (2), 193-200, 2020 | 303 | 2020 |
Accuracy, robustness and scalability of dimensionality reduction methods for single-cell RNA-seq analysis S Sun, J Zhu, Y Ma, X Zhou Genome biology 20, 1-21, 2019 | 190 | 2019 |
SPARK-X: non-parametric modeling enables scalable and robust detection of spatial expression patterns for large spatial transcriptomic studies J Zhu, S Sun, X Zhou Genome biology 22 (1), 184, 2021 | 116 | 2021 |
Heritability estimation and differential analysis of count data with generalized linear mixed models in genomic sequencing studies S Sun, J Zhu, S Mozaffari, C Ober, M Chen, X Zhou Bioinformatics 35 (3), 487-496, 2019 | 63 | 2019 |
Network‐based proteomic analysis for postmenopausal osteoporosis in Caucasian females L Zhang, YZ Liu, Y Zeng, W Zhu, YC Zhao, JG Zhang, JQ Zhu, H He, ... Proteomics 16 (1), 12-28, 2016 | 45 | 2016 |
Neuregulin 4 suppresses NASH-HCC development by restraining tumor-prone liver microenvironment P Zhang, Z Chen, H Kuang, T Liu, J Zhu, L Zhou, Q Wang, X Xiong, ... Cell metabolism 34 (9), 1359-1376. e7, 2022 | 43 | 2022 |
Modeling zero inflation is not necessary for spatial transcriptomics P Zhao, J Zhu, Y Ma, X Zhou Genome Biology 23 (1), 118, 2022 | 31 | 2022 |
SRTsim: spatial pattern preserving simulations for spatially resolved transcriptomics J Zhu, L Shang, X Zhou Genome biology 24 (1), 39, 2023 | 22 | 2023 |
Genome-Wide Differentially Methylated Region Analysis to Reveal Epigenetic Differences of Articular Cartilage in Kashin–Beck Disease and Osteoarthritis Y Fan, D Gao, Y Zhang, J Zhu, F Zhang, L Wang, Y Wen, X Guo, S Sun Frontiers in Cell and Developmental Biology 9, 636291, 2021 | 11 | 2021 |
Network-based transcriptome-wide expression study for postmenopausal osteoporosis L Zhang, TL Peng, L Wang, XH Meng, W Zhu, Y Zeng, JQ Zhu, Y Zhou, ... The Journal of Clinical Endocrinology & Metabolism 105 (8), 2678-2691, 2020 | 10 | 2020 |
ASXL3 controls cortical neuron fate specification through extrinsic self-renewal pathways BT McGrath, P Wu, S Salvi, N Girgla, X Chen, J Zhu, R KC, YC Tsan, ... bioRxiv, 2021.07. 20.452995, 2021 | 2 | 2021 |
A novel nonparametric computational strategy for identifying differential methylation regions X Sun, D Wang, J Zhu, S Sun BMC bioinformatics 23, 1-10, 2022 | | 2022 |
Statistical Methods and Computational Tools for High-throughput Genomics Data J Zhu | | 2022 |
A Nonparametric Method for Detecting Differential DNA Methylation Regions X Sun, J Zhu, S Sun 2020 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2020 | | 2020 |