A genome-based model for adjusting radiotherapy dose (GARD): a retrospective, cohort-based study JG Scott, A Berglund, MJ Schell, I Mihaylov, WJ Fulp, B Yue, E Welsh, ... The lancet oncology 18 (2), 202-211, 2017 | 436 | 2017 |
Differential association of STK11 and TP53 with KRAS mutation-associated gene expression, proliferation and immune surveillance in lung adenocarcinoma MB Schabath, EA Welsh, WJ Fulp, L Chen, JK Teer, ZJ Thompson, ... Oncogene 35 (24), 3209-3216, 2016 | 298 | 2016 |
Global transcriptomic analysis of Cyanothece 51142 reveals robust diurnal oscillation of central metabolic processes J Stöckel, EA Welsh, M Liberton, R Kunnvakkam, R Aurora, HB Pakrasi Proceedings of the National Academy of Sciences 105 (16), 6156-6161, 2008 | 218 | 2008 |
The genome of Cyanothece 51142, a unicellular diazotrophic cyanobacterium important in the marine nitrogen cycle EA Welsh, M Liberton, J Stoeckel, T Loh, T Elvitigala, C Wang, A Wollam, ... Proceedings of the National Academy of Sciences 105 (39), 15094-15099, 2008 | 199 | 2008 |
Differential Transcriptional Analysis of the Cyanobacterium Cyanothece sp. Strain ATCC 51142 during Light-Dark and Continuous-Light Growth J Toepel, E Welsh, TC Summerfield, HB Pakrasi, LA Sherman Journal of bacteriology 190 (11), 3904-3913, 2008 | 187 | 2008 |
Radiosensitivity differences between liver metastases based on primary histology suggest implications for clinical outcomes after stereotactic body radiation therapy KA Ahmed, JJ Caudell, G El-Haddad, AE Berglund, EA Welsh, B Yue, ... International Journal of Radiation Oncology* Biology* Physics 95 (5), 1399-1404, 2016 | 152 | 2016 |
Iterative rank-order normalization of gene expression microarray data EA Welsh, SA Eschrich, AE Berglund, DA Fenstermacher BMC bioinformatics 14, 1-11, 2013 | 131 | 2013 |
Global proteomics reveal an atypical strategy for carbon/nitrogen assimilation by a cyanobacterium under diverse environmental perturbations KM Wegener, AK Singh, JM Jacobs, T Elvitigala, EA Welsh, N Keren, ... Molecular & Cellular Proteomics 9 (12), 2678-2689, 2010 | 128 | 2010 |
Psb29, a Conserved 22-kD Protein, Functions in the Biogenesis of Photosystem II Complexes in Synechocystis and Arabidopsis N Keren, H Ohkawa, EA Welsh, M Liberton, HB Pakrasi The Plant Cell 17 (10), 2768-2781, 2005 | 121 | 2005 |
Dissection of TBK1 signaling via phosphoproteomics in lung cancer cells JY Kim, EA Welsh, U Oguz, B Fang, Y Bai, F Kinose, C Bronk, ... Proceedings of the National Academy of Sciences 110 (30), 12414-12419, 2013 | 117 | 2013 |
Novel Metabolic Attributes of the Genus Cyanothece, Comprising a Group of Unicellular Nitrogen-Fixing Cyanobacteria A Bandyopadhyay, T Elvitigala, E Welsh, J Stöckel, M Liberton, H Min, ... MBio 2 (5), 10.1128/mbio. 00214-11, 2011 | 115* | 2011 |
Proteogenomic landscape of squamous cell lung cancer PA Stewart, EA Welsh, RJC Slebos, B Fang, V Izumi, M Chambers, ... Nature communications 10 (1), 3578, 2019 | 107 | 2019 |
Radiosensitivity of lung metastases by primary histology and implications for stereotactic body radiation therapy using the genomically adjusted radiation dose KA Ahmed, JG Scott, JA Arrington, AO Naghavi, GD Grass, BA Perez, ... Journal of Thoracic Oncology 13 (8), 1121-1127, 2018 | 73 | 2018 |
Diurnal rhythms result in significant changes in the cellular protein complement in the cyanobacterium Cyanothece 51142 J Stöckel, JM Jacobs, TR Elvitigala, M Liberton, EA Welsh, AD Polpitiya, ... PloS one 6 (2), e16680, 2011 | 70 | 2011 |
Overexpression of major CDKN3 transcripts is associated with poor survival in lung adenocarcinoma C Fan, L Chen, Q Huang, T Shen, EA Welsh, JK Teer, J Cai, WD Cress, ... British journal of cancer 113 (12), 1735-1743, 2015 | 65 | 2015 |
Phosphoproteomics Reveals MAPK Inhibitors Enhance MET- and EGFR-Driven AKT Signaling in KRAS-Mutant Lung Cancer JY Kim, EA Welsh, B Fang, Y Bai, F Kinose, SA Eschrich, JM Koomen, ... Molecular Cancer Research 14 (10), 1019-1029, 2016 | 60 | 2016 |
Evaluating somatic tumor mutation detection without matched normal samples JK Teer, Y Zhang, L Chen, EA Welsh, WD Cress, SA Eschrich, ... Human genomics 11, 1-13, 2017 | 59 | 2017 |
Cell Type–specific Adaptive Signaling Responses to KRASG12C Inhibition HS Solanki, EA Welsh, B Fang, V Izumi, L Darville, B Stone, R Franzese, ... Clinical Cancer Research 27 (9), 2533-2548, 2021 | 57 | 2021 |
Critical role for apoptosis signal-regulating kinase 1 in the development of inflammatory K/BxN serum-induced arthritis SJ Mnich, PM Blanner, LG Hu, AF Shaffer, FA Happa, S O'Neil, O Ukairo, ... International immunopharmacology 10 (10), 1170-1176, 2010 | 51 | 2010 |
High sensitivity proteomics assisted discovery of a novel operon involved in the assembly of photosystem II, a membrane protein complex KM Wegener, EA Welsh, LE Thornton, N Keren, JM Jacobs, KK Hixson, ... Journal of Biological Chemistry 283 (41), 27829-27837, 2008 | 51 | 2008 |