关注
Gennady Gorin
Gennady Gorin
Fauna Bio
在 faunabio.com 的电子邮件经过验证 - 首页
标题
引用次数
引用次数
年份
RNA velocity unraveled
G Gorin, M Fang, T Chari, L Pachter
PLOS Computational Biology 18 (9), e1010492, 2022
1012022
Protein velocity and acceleration from single-cell multiomics experiments
G Gorin, V Svensson, L Pachter
Genome biology 21, 1-6, 2020
742020
Interpretable and tractable models of transcriptional noise for the rational design of single-molecule quantification experiments
G Gorin, JJ Vastola, M Fang, L Pachter
Nature Communications 13, 7620, 2022
362022
Modeling bursty transcription and splicing with the chemical master equation
G Gorin, L Pachter
Biophysical Journal 121 (6), 1056-1069, 2022
27*2022
Length biases in single-cell RNA sequencing of pre-mRNA
G Gorin, L Pachter
Biophysical Reports 3 (1), 2023
242023
Special function methods for bursty models of transcription
G Gorin, L Pachter
Physical Review E 102 (2), 022409, 2020
222020
Studying stochastic systems biology of the cell with single-cell genomics data
G Gorin, JJ Vastola, L Pachter
Cell Systems 14 (10), 822-843. e22, 2023
162023
Stochastic simulation and statistical inference platform for visualization and estimation of transcriptional kinetics
G Gorin, M Wang, I Golding, H Xu
Plos one 15 (3), e0230736, 2020
142020
Monod: mechanistic analysis of single-cell RNA sequencing count data
G Gorin, L Pachter
bioRxiv, 2022.06. 11.495771, 2022
132022
Intrinsic and extrinsic noise are distinguishable in a synthesis–export–degradation model of mRNA production
G Gorin, L Pachter
bioRxiv, 2020.09. 25.312868, 2020
132020
Analytic solution of chemical master equations involving gene switching. I: Representation theory and diagrammatic approach to exact solution
JJ Vastola, G Gorin, L Pachter, WR Holmes
arXiv preprint arXiv:2103.10992, 2021
92021
Biophysical modeling with variational autoencoders for bimodal, single-cell RNA sequencing data
M Carilli, G Gorin, Y Choi, T Chari, L Pachter
bioRxiv, 2023
82023
Transient and delay chemical master equations
G Gorin, S Yoshida, L Pachter
bioRxiv, 2022.10. 17.512599, 2022
82022
Spectral neural approximations for models of transcriptional dynamics
G Gorin, M Carilli, T Chari, L Pachter
Biophysical Journal, 2022
82022
Distinguishing biophysical stochasticity from technical noise in single-cell RNA sequencing using Monod
G Gorin, L Pachter
bioRxiv, 2022.06. 11.495771, 2022
72022
Assessing markovian and delay models for single-nucleus RNA sequencing
G Gorin, S Yoshida, L Pachter
Bulletin of Mathematical Biology 85 (11), 114, 2023
42023
Biophysically interpretable inference of cell types from multimodal sequencing data
T Chari, G Gorin, L Pachter
Biorxiv, 2023
32023
A Biophysical Model for ATAC-seq Data Analysis
C Felce, G Gorin, L Pachter
bioRxiv, 2024.01. 25.577262, 2024
12024
Trajectory inference from single-cell genomics data with a process time model
M Fang, G Gorin, L Pachter
bioRxiv, 2024.01. 26.577510, 2024
12024
New and notable: Revisiting the “two cultures” through extrinsic noise
G Gorin, L Pachter
Biophysical Journal 123 (1), 1-3, 2024
12024
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