How framelets enhance graph neural networks X Zheng, B Zhou, J Gao, YG Wang, P Lio, M Li, G Montúfar International Conference on Machine Learning, 2021 | 69 | 2021 |
Decimated framelet system on graphs and fast G-framelet transforms X Zheng, B Zhou, YG Wang, X Zhuang Journal of Machine Learning Research 23 (18), 1-68, 2022 | 36 | 2022 |
MathNet: Haar-like wavelet multiresolution analysis for graph representation learning X Zheng, B Zhou, M Li, YG Wang, J Gao Knowledge-Based Systems 273, 110609, 2023 | 29* | 2023 |
Graph denoising diffusion for inverse protein folding K Yi, B Zhou, Y Shen, P Liò, YG Wang Thirty-seventh Conference on Neural Information Processing Systems., 2023 | 23 | 2023 |
Protein engineering with lightweight graph denoising neural networks B Zhou, L Zheng, B Wu, Y Tan, O Lv, K Yi, G Fan, L Hong Journal of Chemical Information and Modeling 64 (9), 3650-3661, 2024 | 13* | 2024 |
Graph Denoising with Framelet Regularizers B Zhou, R Li, X Zheng, YG Wang, J Gao IEEE Transactions on Pattern Analysis and Machine Intelligence, 2024 | 12 | 2024 |
Robust Graph Representation Learning for Local Corruption Recovery B Zhou, Y Jiang, YG Wang, J Liang, J Gao, S Pan, X Zhang WWW '23: Proceedings of the ACM Web Conference 2023, 438–448, 2023 | 9* | 2023 |
Manifold optimization-assisted Gaussian variational approximation B Zhou, J Gao, MN Tran, R Gerlach Journal of Computational and Graphical Statistics 30 (4), 946-957, 2021 | 9 | 2021 |
Well-conditioned Spectral Transforms for Dynamic Graph Representation B Zhou, X Liu, Y Liu, Y Huang, P Lio, YG Wang Proceedings of the First Learning on Graphs Conference 198, 12:1-12:19, 2022 | 8* | 2022 |
How GNNs Facilitate CNNs in Mining Geometric Information from Large-Scale Medical Images Y Shen, B Zhou, X Xiong, R Gao, YG Wang 2023 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2023 | 6* | 2023 |
Semantical and Geometrical Protein Encoding Toward Enhanced Bioactivity and Thermostability Y Tan, B Zhou, L Zheng, G Fan, L Hong bioRxiv, 2023.12. 01.569522, 2023 | 6* | 2023 |
Framelet message passing X Liu, B Zhou, C Zhang, YG Wang arXiv preprint arXiv:2302.14806, 2023 | 5 | 2023 |
Conditional Protein Denoising Diffusion Generates Programmable Endonucleases B Zhou, L Zheng, B Wu, K Yi, B Zhong, P Lio, L Hong bioRxiv, 2023.08. 10.552783, 2023 | 5* | 2023 |
Embedding graphs on Grassmann manifold B Zhou, X Zheng, YG Wang, M Li, J Gao Neural Networks 152, 322-331, 2022 | 3* | 2022 |
Approximate Equivariance SO (3) Needlet Convolution K Yi, J Chen, YG Wang, B Zhou, P Liò, Y Fan, J Hamann Proceedings of Topological, Algebraic, and Geometric Learning Workshops 2022 …, 2022 | 3 | 2022 |
On the trend-corrected variant of adaptive stochastic optimization methods B Zhou, X Zheng, J Gao 2020 international joint conference on neural networks (IJCNN), 1-8, 2020 | 3 | 2020 |
Conditional Protein Denoising Diffusion Generates Programmable Endonucleases B Zhou, L Zheng, B Wu, K Yi, B Zhong, P Lio, L Hong bioRxiv, 2023.08. 10.552783, 2023 | 2 | 2023 |
Simple, efficient and scalable structure-aware adapter boosts protein language models Y Tan, M Li, B Zhou, B Zhong, L Zheng, P Tan, Z Zhou, H Yu, G Fan, ... arXiv preprint arXiv:2404.14850, 2024 | 1 | 2024 |
Mn2+-Induced Structural Flexibility Enhances the Entire Catalytic Cycle and the Cleavage of Mismatches in Prokaryotic Argonaute Proteins L Zheng, B Zhou, Y Yang, B Zan, B Zhong, B Wu, Y Feng, Q Liu, L Hong Chemical Science 2024 (15), 5612-5626, 2024 | 1 | 2024 |
A unified view on neural message passing with opinion dynamics for social networks O Lv, B Zhou, J Wang, X Xiao, W Zhao, L Zheng arXiv preprint arXiv:2310.01272, 2023 | 1 | 2023 |