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Logan A Walker
Logan A Walker
Bioinformatician and Computational Biologist, University of Michigan
在 umich.edu 的电子邮件经过验证
标题
引用次数
引用次数
年份
Light microscopy based approach for mapping connectivity with molecular specificity
FY Shen, MM Harrington, LA Walker, J Cheng, Hon Pong, ES Boyden, ...
Nature Communications 11 (4632), 2020
452020
ROR1-targeted delivery of miR-29b induces cell cycle arrest and therapeutic benefit in vivo in CLL mouse model
CL Chiang, S Goswami, FW Frissora, Z Xie, PS Yan, R Bundschuh, ...
Blood 134 (5), 432-444, 2019
402019
PP2A is a therapeutically targetable driver of cell fate decisions via a c-Myc/p21 axis in human and murine acute myeloid leukemia
S Goswami, R Mani, J Nunes, CL Chiang, K Zapolnik, E Hu, F Frissora, ...
Blood, The Journal of the American Society of Hematology 139 (9), 1340-1358, 2022
24*2022
Genome-wide DNA hypermethylation opposes healing in patients with chronic wounds by impairing epithelial-mesenchymal transition
K Singh, Y Rustagi, AS Abouhashem, S Tabasum, P Verma, E Hernandez, ...
The Journal of Clinical Investigation 132 (17), 2022
232022
The molecular landscape of neural differentiation in the developing Drosophila brain revealed by targeted scRNA-seq and multi-informatic analysis
NS Michki, Y Li, K Sanjasaz, Y Zhao, FY Shen, LA Walker, W Cao, CY Lee, ...
Cell Reports 35 (4), 109039, 2021
222021
Whole transcriptome analysis of renal intercalated cells predicts lipopolysaccharide mediated inhibition of retinoid X receptor alpha function
V Saxena, J Fitch, J Ketz, P White, A Wetzel, MA Chanley, JD Spencer, ...
Scientific Reports 9 (1), 545, 2019
202019
Bitbow Enables Highly Efficient Neuronal Lineage Tracing and Morphology Reconstruction in Single Drosophila Brains
Y Li, LA Walker, Y Zhao, EM Edwards, NS Michki, HPJ Cheng, M Ghazzi, ...
Frontiers in Neural Circuits 15 (732183), 2021
17*2021
CLEAR: Coverage-based limiting-cell experiment analysis for RNA-seq
LA Walker, MG Sovic, CL Chiang, E Hu, JK Denninger, X Chen, ED Kirby, ...
Journal of Translational Medicine 18 (1), 63, 2020
132020
Robust transcriptional profiling and identification of differentially expressed genes with low input RNA sequencing of adult hippocampal neural stem and progenitor populations
JK Denninger, LA Walker, X Chen, A Turkoglu, A Pan, Z Tapp, ...
Frontiers in Molecular Neuroscience 15 (810722), 2022
122022
Unsupervised neural tracing in densely labeled multispectral brainbow images
B Duan, LA Walker, DH Roossien, FY Shen, D Cai, Y Yan
2021 IEEE 18th International Symposium on Biomedical Imaging (ISBI), 1122-1126, 2021
72021
Post-explant profiling of subcellular-scale carbon fiber intracortical electrodes and surrounding neurons enables modeling of recorded electrophysiology
JG Letner, PR Patel, JC Hsieh, IMS Flores, E Della Valle, LA Walker, ...
Journal of Neural Engineering 20 (2), 026019, 2023
52023
Teaching Python for Data Science: Collaborative development of a modular & interactive curriculum
M Duda, KL Sovacool, N Farzaneh, VK Nguyen, SE Haynes, H Falk, ...
Journal of Open Source Education 4 (46), 138, 2021
52021
nGauge: Integrated and extensible neuron morphology analysis in Python
LA Walker, JS Williams, Y Li, DH Roossien, WJ Lee, NS Michki, D Cai
Neuroinformatics, 1-10, 2022
42022
Leukemia-initiating HSCs in chronic lymphocytic leukemia reveal clonal leukemogenesis and differential drug sensitivity
CL Chiang, EY Hu, L Chang, J Labanowska, K Zapolnik, X Mo, J Shi, ...
Cell Reports 40 (3), 111115, 2022
32022
TraceMontage: A method for merging multiple independent neuronal traces
AS Dizaji, LA Walker, D Cai
Journal of Neuroscience Methods 332, 108560, 2020
22020
A Comparison of Lossless Compression Methods in Microscopy Data Storage Applications
LA Walker, Y Li, M McGlothlin, D Cai
bioRxiv, 2023.01. 24.525380, 2023
12023
Scalable Image Storage Format
D Cai, LA Walker
US Patent App. 18/378,485, 2024
2024
Optimized Neuron Tracing Using Post Hoc Reanalysis
S Azzouz, LA Walker, A Doerner, KL Geisel, AKR Rivera, Y Li, ...
2023 IEEE 20th International Symposium on Biomedical Imaging (ISBI), 1-5, 2023
2023
A Microscopy and Bioinformatics Toolkit for High-Throughput Connectomics Studies
L Walker
2023
A low-cost and robust microscope hardware trigger interface board
LA Walker, NS Michki, D Cai
OSF Preprints, 2023
2023
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