Pan-cancer analysis of whole genomes Nature 578 (7793), 82-93, 2020 | 1552 | 2020 |
The evolutionary history of 2,658 cancers M Gerstung, C Jolly, I Leshchiner, SC Dentro, S Gonzalez, D Rosebrock, ... Nature 578 (7793), 122-128, 2020 | 903 | 2020 |
Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes SC Dentro, I Leshchiner, K Haase, M Tarabichi, J Wintersinger, ... Cell 184 (8), 2239-2254. e39, 2021 | 310 | 2021 |
BitPhylogeny: a probabilistic framework for reconstructing intra-tumor phylogenies K Yuan, T Sakoparnig, F Markowetz, N Beerenwinkel Genome biology 16, 1-16, 2015 | 139 | 2015 |
Pathologygan: Learning deep representations of cancer tissue AC Quiros, R Murray-Smith, K Yuan arXiv preprint arXiv:1907.02644, 2019 | 88 | 2019 |
Spatial and temporal clonal evolution of intrahepatic cholangiocarcinoma LQ Dong, Y Shi, LJ Ma, LX Yang, XY Wang, S Zhang, ZC Wang, M Duan, ... Journal of hepatology 69 (1), 89-98, 2018 | 77 | 2018 |
A phylogenetic latent feature model for clonal deconvolution F Marass, F Mouliere, K Yuan, N Rosenfeld, F Markowetz The Annals of Applied Statistics, 2377-2404, 2016 | 56 | 2016 |
Inferring structural variant cancer cell fraction M Cmero, K Yuan, CS Ong, J Schröder, NM Corcoran, T Papenfuss, ... Nature communications 11 (1), 730, 2020 | 46* | 2020 |
Portraits of genetic intra-tumour heterogeneity and subclonal selection across cancer types SC Dentro, I Leshchiner, K Haase, M Tarabichi, J Wintersinger, ... BioRxiv, 312041, 2018 | 43 | 2018 |
BaalChIP: Bayesian analysis of allele-specific transcription factor binding in cancer genomes I de Santiago, W Liu, K Yuan, M O’Reilly, CSR Chilamakuri, BAJ Ponder, ... Genome biology 18, 1-17, 2017 | 34 | 2017 |
Online variational inference for state-space models with point-process observations AZ Mangion, K Yuan, V Kadirkamanathan, M Niranjan, G Sanguinetti Neural computation 23 (8), 1967-1999, 2011 | 23 | 2011 |
Markov chain Monte Carlo methods for state-space models with point process observations K Yuan, M Girolami, M Niranjan Neural Computation 24 (6), 1462-1486, 2012 | 22 | 2012 |
Adversarial learning of cancer tissue representations A Claudio Quiros, N Coudray, A Yeaton, W Sunhem, R Murray-Smith, ... Medical Image Computing and Computer Assisted Intervention–MICCAI 2021: 24th …, 2021 | 20* | 2021 |
Ccube: a fast and robust method for estimating cancer cell fractions K Yuan, G Macintyre, W Liu, PCAWG-11 working group, F Markowetz bioRxiv, 484402, 2018 | 17 | 2018 |
Reconstructing evolving signalling networks by hidden Markov nested effects models X Wang, K Yuan, C Hellmayr, W Liu, F Markowetz The Annals of Applied Statistics, 448-480, 2014 | 15 | 2014 |
Mutational signature dynamics indicate SARS-CoV-2’s evolutionary capacity is driven by host antiviral molecules KD Lamb, MM Luka, M Saathoff, RJ Orton, MVT Phan, M Cotten, K Yuan, ... PLoS computational biology 20 (1), e1011795, 2024 | 9* | 2024 |
Estimating a state-space model from point process observations: A note on convergence K Yuan, M Niranjan Neural computation 22 (8), 1993-2001, 2010 | 9 | 2010 |
Mapping the landscape of histomorphological cancer phenotypes using self-supervised learning on unannotated pathology slides A Claudio Quiros, N Coudray, A Yeaton, X Yang, B Liu, H Le, L Chiriboga, ... Nature Communications 15 (1), 4596, 2024 | 7* | 2024 |
Pervasive intra-tumour heterogeneity and subclonal selection across cancer types S Dentro, I Leshchiner, K Haase, J Wintersinger, A Deshwar, M Tarabichi, ... Cancer Research 78 (13_Supplement), 3000-3000, 2018 | 7 | 2018 |
Reliability-aided multiuser detection in time-frequency-domain spread multicarrier DS-CDMA systems K Yuan, W Liu, LL Yang VTC Spring 2009-IEEE 69th Vehicular Technology Conference, 1-5, 2009 | 3 | 2009 |