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| Mapping of long-range associations throughout the fission yeast genome reveals global genome organization linked to transcriptional regulation H Tanizawa, O Iwasaki, A Tanaka, JR Capizzi, P Wickramasinghe, M Lee, ... Nucleic acids research 38 (22), 8164-8177, 2010 | 276 | 2010 |
| Alternative transcription exceeds alternative splicing in generating the transcriptome diversity of cerebellar development S Pal, R Gupta, H Kim, P Wickramasinghe, V Baubet, LC Showe, ... Genome research 21 (8), 1260-1272, 2011 | 224 | 2011 |
| A role for CTCF and cohesin in subtelomere chromatin organization, TERRA transcription, and telomere end protection Z Deng, Z Wang, N Stong, R Plasschaert, A Moczan, HS Chen, S Hu, ... The EMBO journal 31 (21), 4165-4178, 2012 | 200 | 2012 |
| Conservation of copy number profiles during engraftment and passaging of patient-derived cancer xenografts XY Woo, J Giordano, A Srivastava, ZM Zhao, MW Lloyd, R de Bruijn, ... Nature genetics 53 (5), 761-761, 2021 | 156 | 2021 |
| ADAR1 controls apoptosis of stressed cells by inhibiting Staufen1-mediated mRNA decay M Sakurai, Y Shiromoto, H Ota, C Song, AV Kossenkov, ... Nature structural & molecular biology 24 (6), 534-543, 2017 | 150 | 2017 |
| BET inhibitors suppress ALDH activity by targeting ALDH1A1 super-enhancer in ovarian cancer Y Yokoyama, H Zhu, JH Lee, AV Kossenkov, SY Wu, JM Wickramasinghe, ... Cancer research 76 (21), 6320-6330, 2016 | 150 | 2016 |
| Identification of sensitive serum microRNA biomarkers for radiation biodosimetry NK Jacob, JV Cooley, TN Yee, J Jacob, H Alder, P Wickramasinghe, ... PloS one 8 (2), e57603, 2013 | 146 | 2013 |
| Tumor-infiltrating mast cells are associated with resistance to anti-PD-1 therapy R Somasundaram, T Connelly, R Choi, H Choi, A Samarkina, L Li, ... Nature communications 12 (1), 346, 2021 | 137 | 2021 |
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| Follicle-stimulating hormone receptor is expressed by most ovarian cancer subtypes and is a safe and effective immunotherapeutic target A Perales-Puchalt, N Svoronos, MR Rutkowski, MJ Allegrezza, AJ Tesone, ... Clinical Cancer Research 23 (2), 441-453, 2017 | 99 | 2017 |
| Genome-wide analysis of host-chromosome binding sites for Epstein-Barr Virus Nuclear Antigen 1 (EBNA1) F Lu, P Wikramasinghe, J Norseen, K Tsai, P Wang, L Showe, ... Virology journal 7, 1-17, 2010 | 98 | 2010 |
| Genome wide ChIP-chip analyses reveal important roles for CTCF in Drosophila genome organization ST Smith, P Wickramasinghe, A Olson, D Loukinov, L Lin, J Deng, ... Developmental biology 328 (2), 518-528, 2009 | 93 | 2009 |
| Frontline Science: Microbiota reconstitution restores intestinal integrity after cisplatin therapy A Perales-Puchalt, J Perez-Sanz, KK Payne, N Svoronos, MJ Allegrezza, ... Journal of leukocyte biology 103 (5), 799-805, 2018 | 84 | 2018 |
| Cohesins repress Kaposi's sarcoma-associated herpesvirus immediate early gene transcription during latency HS Chen, P Wikramasinghe, L Showe, PM Lieberman Journal of virology 86 (17), 9454-9464, 2012 | 77 | 2012 |
| Identification of MEF2B, EBF1, and IL6R as Direct Gene Targets of Epstein-Barr Virus (EBV) Nuclear Antigen 1 Critical for EBV-Infected B-Lymphocyte Survival I Tempera, A De Leo, AV Kossenkov, M Cesaroni, H Song, N Dawany, ... Journal of virology 90 (1), 345-355, 2016 | 75 | 2016 |
| Identification of host-chromosome binding sites and candidate gene targets for Kaposi's sarcoma-associated herpesvirus LANA F Lu, K Tsai, HS Chen, P Wikramasinghe, RV Davuluri, L Showe, ... Journal of virology 86 (10), 5752-5762, 2012 | 72 | 2012 |
| Genome-wide mapping of RNA Pol-II promoter usage in mouse tissues by ChIP-seq H Sun, J Wu, P Wickramasinghe, S Pal, R Gupta, A Bhattacharyya, ... Nucleic acids research 39 (1), 190-201, 2011 | 64 | 2011 |
| RNA-Seq of Kaposi’s sarcoma reveals alterations in glucose and lipid metabolism FY Tso, AV Kossenkov, SJ Lidenge, O Ngalamika, JR Ngowi, ... PLoS pathogens 14 (1), e1006844, 2018 | 52 | 2018 |
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