Antimicrobial resistance and molecular epidemiology using whole-genome sequencing of Neisseria gonorrhoeae in Ireland, 2014–2016: focus on extended … L Ryan, D Golparian, N Fennelly, L Rose, P Walsh, B Lawlor, ... European Journal of Clinical Microbiology & Infectious Diseases 37, 1661-1672, 2018 | 49 | 2018 |
Engineering bioinformatics: building reliability, performance and productivity into bioinformatics software B Lawlor, P Walsh Bioengineered 6 (4), 193-203, 2015 | 40 | 2015 |
Field of genes: using Apache Kafka as a bioinformatic data repository B Lawlor, R Lynch, M Mac Aogáin, P Walsh GigaScience 7 (4), giy036, 2018 | 17 | 2018 |
The democratization of bioinformatics: A software engineering perspective B Lawlor, RD Sleator GigaScience 9 (6), giaa063, 2020 | 10 | 2020 |
Fourteen draft genome sequences for the first reported cases of azithromycin-resistant Neisseria gonorrhoeae in Ireland M Mac Aogáin, N Fennelly, A Walsh, Y Lynagh, M Bekaert, B Lawlor, ... Genome announcements 5 (23), 10.1128/genomea. 00403-17, 2017 | 10 | 2017 |
The roles of code in biology B Lawlor, RD Sleator Science Progress 104 (2), 00368504211010570, 2021 | 6 | 2021 |
Packaging and containerization of computational methods M Alser, B Lawlor, RJ Abdill, S Waymost, R Ayyala, N Rajkumar, ... Nature Protocols, 1-11, 2024 | 4 | 2024 |
ImmunoAdept–bringing blood microbiome profiling to the clinical practice P Walsh, BG Andrade, C Palu, J Wu, B Lawlor, B Kelly, M Hemmje, ... 2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2018 | 3 | 2018 |
Metaplat: a cloud based platform for analysis and visualisation of metagenomics data N Konstantinidou, P Walsh, X Lu, M Bekaert, B Lawlor, B Kelly, H Zheng, ... Proceedings of the Collaborative European Research Conference (CERC 2016 …, 2016 | 3 | 2016 |
The Role of Software Engineering in Bioinformatics BS Lawlor | 2 | 2021 |
Simplicity DiffExpress: A Bespoke Cloud-Based Interface for RNA-seq Differential Expression Modeling and Analysis CC Palu, M Ribeiro-Alves, Y Wu, B Lawlor, PV Baranov, B Kelly, P Walsh Frontiers in genetics 10, 356, 2019 | 2 | 2019 |
The weekend warrior: how to build a genomic supercomputer in your spare time using streams and actors in Scala B Lawlor, P Walsh 2016 Intl IEEE Conferences on Ubiquitous Intelligence & Computing, Advanced …, 2016 | 2 | 2016 |
Visualizing next-generation sequencing cancer data sets with cloud computing P Walsh, B Lawlor, B Kelly, T Manning, T Heuss, M Leopold AVI Workshop on Big Data Applications, 50-62, 2016 | 2 | 2016 |
Towards a host-pathogen integrated molecular diagnostic for bacterial infection in newborn babies T Forster, W Dantoft, K Kropp, P Dickinson, CE Smith, D Mullins, B Kelly, ... | 1 | |
04187 The genetic landscape of porphyria in Ireland S Savage, M Mac Aogáin, B Lawlor, C Maher, N Stein, A McConnon, ... BMJ Open Gastroenterology 11 (Suppl 1), 2024 | | 2024 |
A cloud-based genetic database for characterisation of missense variants associated with the acute hepatic porphyrias M Mac Aogain, B Lawlor, S Savage, E Walsh, N Brazil, E Rasheed, ... IRISH JOURNAL OF MEDICAL SCIENCE 191 (SUPPL 4), 126-126, 2022 | | 2022 |
PorphyriaDB-a cloud-driven genetic database for the acute hepatic porphyrias M Mac Aogain, B Lawlor, S Savage, E Walsh, N Brazil, E Rasheed, ... IRISH JOURNAL OF MEDICAL SCIENCE 191 (SUPPL 3), S77-S77, 2022 | | 2022 |
Packaging, containerization, and virtualization of computational omics methods: Advances, challenges, and opportunities M Alser, S Waymost, R Ayyala, B Lawlor, RJ Abdill, N Rajkumar, ... arXiv preprint arXiv:2203.16261, 2022 | | 2022 |
Simplicity DiffExpress: A bespoke cloud-based interface for RNA-seq CC Palu, M Ribeiro-Alves, Y Wu, B Lawlor, PV Baranov, B Kelly, P Walsh | | 2019 |
Fourteen Draft Genome Sequences for the First Reported Cases of Azithromycin-Resistant Neisseria gonorrhoeae in Ireland N Fennelly, A Walsh, L Yvonne, B Michaël, B Lawlor, P Walsh, B Kelly, ... Microbiology Resource Announcements 5 (23), 2017 | | 2017 |