Assessing vertebrate biodiversity in a kelp forest ecosystem using environmental DNA JA Port, JL O'Donnell, OC Romero‐Maraccini, PR Leary, SY Litvin, ... Molecular ecology 25 (2), 527-541, 2016 | 451 | 2016 |
Spatial distribution of environmental DNA in a nearshore marine habitat JL O’Donnell, RP Kelly, AO Shelton, JF Samhouri, NC Lowell, ... PeerJ 5, e3044, 2017 | 177* | 2017 |
Genetic and manual survey methods yield different and complementary views of an ecosystem RP Kelly, CJ Closek, JL O'Donnell, JE Kralj, AO Shelton, JF Samhouri Frontiers in Marine Science 3, 283, 2017 | 161 | 2017 |
taxize: Taxonomic information from around the web S Chamberlain, E Szoecs, Z Foster, Z Arendsee, C Boettiger, K Ram, ... R package version 0.9 92, 2020 | 136 | 2020 |
Indexed PCR primers induce template-specific bias in large-scale DNA sequencing studies JL O’Donnell, RP Kelly, NC Lowell, JA Port PloS one 11 (3), e0148698, 2016 | 122 | 2016 |
Environmental DNA survey captures patterns of fish and invertebrate diversity across a tropical seascape BN Nguyen, EW Shen, J Seemann, AMS Correa, JL O’Donnell, AH Altieri, ... Scientific reports 10 (1), 6729, 2020 | 118 | 2020 |
Genetic signatures of ecological diversity along an urbanization gradient RP Kelly, JL O’Donnell, NC Lowell, AO Shelton, JF Samhouri, ... PeerJ 4, e2444, 2016 | 94* | 2016 |
A framework for inferring biological communities from environmental DNA AO Shelton, JL O'Donnell, JF Samhouri, N Lowell, GD Williams, RP Kelly Ecological Applications 26 (6), 1645-1659, 2016 | 89 | 2016 |
Environmental DNA provides quantitative estimates of a threatened salmon species AO Shelton, RP Kelly, JL O'Donnell, L Park, P Schwenke, C Greene, ... Biological Conservation 237, 383-391, 2019 | 86 | 2019 |
Indirect effects of a key ecosystem engineer alter survival and growth of foundation coral species JSS White, JL O'Donnell Ecology 91 (12), 3538-3548, 2010 | 48 | 2010 |
The indirect paths to cascading effects of extinctions in mutualistic networks MM Pires, JL O'Donnell, LA Burkle, C Díaz‐Castelazo, DH Hembry, ... Ecology 101 (7), e03080, 2020 | 43 | 2020 |
Diverse interactions and ecosystem engineering can stabilize community assembly JD Yeakel, MM Pires, MAM de Aguiar, JL O’Donnell, PR Guimarães Jr, ... Nature communications 11 (1), 3307, 2020 | 37 | 2020 |
Revealing biases in the sampling of ecological interaction networks MAM de Aguiar, EA Newman, MM Pires, JD Yeakel, C Boettiger, ... PeerJ 7, e7566, 2019 | 26 | 2019 |
Natural endocrine profiles of the group‐living skunk anemonefish Amphiprion akallopisos in relation to their size‐based dominance hierarchy SC Mills, JL O'Donnell, G Bernardi, R Beldade Journal of Fish Biology 92 (3), 773-789, 2018 | 21 | 2018 |
Life history, larval dispersal, and connectivity in coral reef fish among the Scattered Islands of the Mozambique Channel JL O’Donnell, R Beldade, SC Mills, HE Williams, G Bernardi Coral Reefs 36, 223-232, 2017 | 20 | 2017 |
Ghosts of thermal past: reef fish exposed to historic high temperatures have heightened stress response to further stressors SC Mills, R Beldade, P Chabanet, L Bigot, JL O’donnell, G Bernardi Coral Reefs 34, 1255-1260, 2015 | 17 | 2015 |
Variation in partner benefits in a shrimp—sea anemone symbiosis CS McKeon, JL O’Donnell PeerJ 3, e1409, 2015 | 8 | 2015 |
Gene flow throughout the evolutionary history of a colour polymorphic and generalist clownfish S Schmid, M Bachmann Salvy, A Garcia Jimenez, JAM Bertrand, F Cortesi, ... Molecular Ecology, e17436, 2024 | 3 | 2024 |
How much city is too much city? Biodiversity and ecosystem functioning along an urban gradient at the interface of land and sea JF Samhouri, AO Shelton, GD Williams, BE Feist, SM Hennessey, K Bartz, ... Frontiers in Marine Science 9, 931319, 2022 | 2 | 2022 |
Interactions and evolution of the anemonefishes JL O'Donnell University of California, Santa Cruz, 2014 | 1 | 2014 |