Protein interactions: two methods for assessment of the reliability of high throughput observations CM Deane, Ł Salwinski, I Xenarios, D Eisenberg Molecular & Cellular Proteomics 1 (5), 349-356, 2002 | 909 | 2002 |
HOMSTRAD: a database of protein structure alignments for homologous families K Mizuguchi, CM Deane, TL Blundell, JP Overington Protein science 7 (11), 2469-2471, 1998 | 653 | 1998 |
JOY: protein sequence-structure representation and analysis. K Mizuguchi, CM Deane, TL Blundell, MS Johnson, JP Overington Bioinformatics (Oxford, England) 14 (7), 617-623, 1998 | 474 | 1998 |
SAbDab: the structural antibody database J Dunbar, K Krawczyk, J Leem, T Baker, A Fuchs, G Georges, J Shi, ... Nucleic acids research 42 (D1), D1140-D1146, 2014 | 382 | 2014 |
Reduced amounts and abnormal forms of phospholipase C zeta (PLCζ) in spermatozoa from infertile men E Heytens, J Parrington, K Coward, C Young, S Lambrecht, SY Yoon, ... Human Reproduction 24 (10), 2417-2428, 2009 | 327 | 2009 |
CoV-AbDab: the coronavirus antibody database MIJ Raybould, A Kovaltsuk, C Marks, CM Deane Bioinformatics 37 (5), 734-735, 2021 | 242 | 2021 |
ANARCI: antigen receptor numbering and receptor classification J Dunbar, CM Deane Bioinformatics 32 (2), 298-300, 2016 | 226 | 2016 |
Five computational developability guidelines for therapeutic antibody profiling MIJ Raybould, C Marks, K Krawczyk, B Taddese, J Nowak, AP Lewis, ... Proceedings of the National Academy of Sciences 116 (10), 4025-4030, 2019 | 215 | 2019 |
A multi-crystal method for extracting obscured crystallographic states from conventionally uninterpretable electron density NM Pearce, T Krojer, AR Bradley, P Collins, RP Nowak, R Talon, ... Nature communications 8 (1), 15123, 2017 | 212 | 2017 |
Freely available conformer generation methods: how good are they? JP Ebejer, GM Morris, CM Deane Journal of chemical information and modeling 52 (5), 1146-1158, 2012 | 208 | 2012 |
FREAD revisited: accurate loop structure prediction using a database search algorithm Y Choi, CM Deane Proteins: Structure, Function, and Bioinformatics 78 (6), 1431-1440, 2010 | 194 | 2010 |
Synonymous codon usage influences the local protein structure observed R Saunders, CM Deane Nucleic acids research 38 (19), 6719-6728, 2010 | 192 | 2010 |
Avoiding false positive conclusions in molecular simulation: the importance of replicas B Knapp, L Ospina, CM Deane Journal of Chemical Theory and Computation 14 (12), 6127-6138, 2018 | 184 | 2018 |
CODA: a combined algorithm for predicting the structurally variable regions of protein models CM Deane, TL Blundell Protein Science 10 (3), 599-612, 2001 | 180 | 2001 |
ABodyBuilder: Automated antibody structure prediction with data–driven accuracy estimation J Leem, J Dunbar, G Georges, J Shi, CM Deane MAbs 8 (7), 1259-1268, 2016 | 172 | 2016 |
SAbPred: a structure-based antibody prediction server J Dunbar, K Krawczyk, J Leem, C Marks, J Nowak, C Regep, G Georges, ... Nucleic acids research 44 (W1), W474-W478, 2016 | 158 | 2016 |
Revisiting date and party hubs: novel approaches to role assignment in protein interaction networks S Agarwal, CM Deane, MA Porter, NS Jones PLoS computational biology 6 (6), e1000817, 2010 | 156 | 2010 |
Improving B-cell epitope prediction and its application to global antibody-antigen docking K Krawczyk, X Liu, T Baker, J Shi, CM Deane Bioinformatics 30 (16), 2288-2294, 2014 | 151 | 2014 |
A maternally inherited autosomal point mutation in human phospholipase C zeta (PLCζ) leads to male infertility J Kashir, M Konstantinidis, C Jones, B Lemmon, H Chang Lee, R Hamer, ... Human reproduction 27 (1), 222-231, 2012 | 151 | 2012 |
Deep generative models for 3D linker design F Imrie, AR Bradley, M van der Schaar, CM Deane Journal of chemical information and modeling 60 (4), 1983-1995, 2020 | 145 | 2020 |