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Daniel Nicorici
Daniel Nicorici
在 helsinki.fi 的电子邮件经过验证
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FusionCatcher – a tool for finding somatic fusion genes in paired-end RNA-sequencing data
D. Nicorici, M. Satalan, H. Edgren, S. Kangaspeska, A. Murumagi, O ...
http://biorxiv.org/content/early/2014/11/19/011650, 2014
396*2014
Identification of fusion genes in breast cancer by paired-end RNA-sequencing
H Edgren, A Murumagi, S Kangaspeska, D Nicorici, V Hongisto, K Kleivi, ...
Genome biology 12, 1-13, 2011
3882011
Systematic analysis of microRNAs targeting the androgen receptor in prostate cancer cells
P Östling, SK Leivonen, A Aakula, P Kohonen, R Mäkelä, Z Hagman, ...
Cancer research 71 (5), 1956-1967, 2011
3192011
Gene-expression profiling predicts recurrence in Dukes’ C colorectal cancer
D Arango, P Laiho, A Kokko, P Alhopuro, H Sammalkorpi, R Salovaara, ...
Gastroenterology 129 (3), 874-884, 2005
1572005
Global Gene Expression Profile of Human Cord Blood–Derived CD133+ Cells
T Jaatinen, H Hemmoranta, S Hautaniemi, J Niemi, D Nicorici, J Laine, ...
Stem cells 24 (3), 631-641, 2006
1542006
The gene expression signature of genomic instability in breast cancer is an independent predictor of clinical outcome
JK Habermann, J Doering, S Hautaniemi, UJ Roblick, NK Bündgen, ...
International journal of cancer 124 (7), 1552-1564, 2009
1402009
CIP2A signature reveals the MYC dependency of CIP2A-regulated phenotypes and its clinical association with breast cancer subtypes
M Niemelä, O Kauko, H Sihto, JP Mpindi, D Nicorici, P Pernilä, ...
Oncogene 31 (39), 4266-4278, 2012
982012
MicroRNA expression profiling reveals miRNA families regulating specific biological pathways in mouse frontal cortex and hippocampus
J Juhila, T Sipilä, K Icay, D Nicorici, P Ellonen, A Kallio, E Korpelainen, ...
PloS one 6 (6), e21495, 2011
982011
Reanalysis of RNA-sequencing data reveals several additional fusion genes with multiple isoforms
S Kangaspeska, S Hultsch, H Edgren, D Nicorici, A Murumägi, ...
PloS one 7 (10), e48745, 2012
892012
Transcriptional profiling reflects shared and unique characters for CD34+ and CD133+ cells
H Hemmoranta, S Hautaniemi, J Niemi, D Nicorici, J Laine, O Yli-Harja, ...
Stem cells and development 15 (6), 839-851, 2006
492006
Time‐series nasal epithelial transcriptomics during natural pollen exposure in healthy subjects and allergic patients
P Mattila, J Renkonen, S Toppila‐Salmi, V Parviainen, S Joenväärä, ...
Allergy 65 (2), 175-183, 2010
482010
Analysis of signaling pathways in 90 cancer cell lines by protein lysate array
K Natarajan Mendes, D Nicorici, D Cogdell, I Tabus, O Yli-Harja, R Guerra, ...
Journal of proteome research 6 (7), 2753-2767, 2007
422007
Segmentation of DNA into coding and noncoding regions based on recursive entropic segmentation and stop-codon statistics
D Nicorici, J Astola
EUrasiP Journal on advances in signal Processing 2004, 1-11, 2004
332004
Dissection of signaling pathways in fourteen breast cancer cell lines using reverse-phase protein lysate microarray
M Akkiprik, D Nicorici, D Cogdell, YJ Jia, A Hategan, I Tabus, O Yli-Harja, ...
Technology in cancer research & treatment 5 (6), 543-551, 2006
322006
Adrenals contribute to growth of castration-resistant VCaP prostate cancer xenografts
R Huhtaniemi, R Oksala, M Knuuttila, A Mehmood, E Aho, TD Laajala, ...
The American journal of pathology 188 (12), 2890-2901, 2018
232018
Finding borders between coding and noncoding DNA regions using recursive segmentation and statistics of stop codons
D Nicorici, JA Berger, J Astola, SK Mitra
Proceedings of the 2003 Finnish Signal Processing Symposium, FINSIG'03 …, 2003
192003
Information divergence measures-for detection of borders between coding and noncoding DNA regions using recursive entropic segmentation
D Nicorici, J Astola
IEEE Workshop on Statistical Signal Processing, 2003, 577-580, 2003
122003
Computational identification of exons in DNA with a hidden Markov model
D Nicorici, J Astola, I Tabus
Work shop on Genomic Signal Processing and Statistics, 2002
102002
Exploration of extracellular vesicle miRNAs, targeted mRNAs and pathways in prostate cancer: relation to disease status and progression
M Puhka, L Thierens, D Nicorici, T Forsman, T Mirtti, T af Hällström, ...
Cancers 14 (3), 532, 2022
92022
An MDL method for finding large domains of similarly expressed genes
D Nicorici, O Yli-Harja, J Astola
Proceedings of Workshop on Genomic Signal Processing and Statistics, GENSIPS …, 2004
42004
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