Model-informed COVID-19 vaccine prioritization strategies by age and serostatus KM Bubar, K Reinholt, SM Kissler, M Lipsitch, S Cobey, YH Grad, ... Science 371 (6352), 916-921, 2021 | 831 | 2021 |
Epochal evolution shapes the phylodynamics of interpandemic influenza A (H3N2) in humans K Koelle, S Cobey, B Grenfell, M Pascual Science 314 (5807), 1898-1903, 2006 | 560 | 2006 |
Contemporary H3N2 influenza viruses have a glycosylation site that alters binding of antibodies elicited by egg-adapted vaccine strains SJ Zost, K Parkhouse, ME Gumina, K Kim, S Diaz Perez, PC Wilson, ... Proceedings of the National Academy of Sciences 114 (47), 12578-12583, 2017 | 539 | 2017 |
Practical considerations for measuring the effective reproductive number, Rt KM Gostic, L McGough, EB Baskerville, S Abbott, K Joshi, C Tedijanto, ... PLoS computational biology 16 (12), e1008409, 2020 | 472 | 2020 |
Immune history and influenza virus susceptibility S Cobey, SE Hensley Current opinion in virology 22, 105-111, 2017 | 238 | 2017 |
Global migration dynamics underlie evolution and persistence of human influenza A (H3N2) T Bedford, S Cobey, P Beerli, M Pascual PLoS pathogens 6 (5), e1000918, 2010 | 213 | 2010 |
Immune history and influenza vaccine effectiveness JA Lewnard, S Cobey Vaccines 6 (2), 28, 2018 | 204 | 2018 |
Niche and neutral effects of acquired immunity permit coexistence of pneumococcal serotypes S Cobey, M Lipsitch Science 335 (6074), 1376-1380, 2012 | 200 | 2012 |
Predicting the epidemic sizes of influenza A/H1N1, A/H3N2, and B: a statistical method E Goldstein, S Cobey, S Takahashi, JC Miller, M Lipsitch PLoS medicine 8 (7), e1001051, 2011 | 200 | 2011 |
Investigate the origins of COVID-19 JD Bloom, YA Chan, RS Baric, PJ Bjorkman, S Cobey, BE Deverman, ... Science 372 (6543), 694-694, 2021 | 184 | 2021 |
Modeling infectious disease dynamics S Cobey Science 368 (6492), 713-714, 2020 | 178 | 2020 |
Influenza virus vaccination elicits poorly adapted B cell responses in elderly individuals C Henry, NY Zheng, M Huang, A Cabanov, KT Rojas, K Kaur, SF Andrews, ... Cell Host & Microbe 25 (3), 357-366. e6, 2019 | 151 | 2019 |
Age-specific differences in the dynamics of protective immunity to influenza S Ranjeva, R Subramanian, VJ Fang, GM Leung, DKM Ip, RAPM Perera, ... Nature Communications 10 (1), 1660, 2019 | 118 | 2019 |
Concerns about SARS-CoV-2 evolution should not hold back efforts to expand vaccination S Cobey, DB Larremore, YH Grad, M Lipsitch Nature Reviews Immunology 21 (5), 330-335, 2021 | 116 | 2021 |
Preexisting immunity shapes distinct antibody landscapes after influenza virus infection and vaccination in humans HL Dugan, JJ Guthmiller, P Arevalo, M Huang, YQ Chen, KE Neu, ... Science translational medicine 12 (573), eabd3601, 2020 | 97 | 2020 |
Viral factors in influenza pandemic risk assessment M Lipsitch, W Barclay, R Raman, CJ Russell, JA Belser, S Cobey, ... Elife 5, e18491, 2016 | 92 | 2016 |
Improving influenza vaccine virus selectionReport of a WHO informal consultation held at WHO headquarters, Geneva, Switzerland, 14–16 June 2010 WHO Writing Group, WK Ampofo, N Baylor, S Cobey, NJ Cox, S Daves, ... Influenza and other respiratory viruses 6 (2), 142-152, 2012 | 92 | 2012 |
Strength and tempo of selection revealed in viral gene genealogies T Bedford, S Cobey, M Pascual BMC evolutionary biology 11, 1-16, 2011 | 84 | 2011 |
Recurring infection with ecologically distinct HPV types can explain high prevalence and diversity SL Ranjeva, EB Baskerville, V Dukic, LL Villa, E Lazcano-Ponce, ... Proceedings of the National Academy of Sciences 114 (51), 13573-13578, 2017 | 75 | 2017 |
Trade-offs in antibody repertoires to complex antigens LM Childs, EB Baskerville, S Cobey Philosophical Transactions of the Royal Society B: Biological Sciences 370 …, 2015 | 71 | 2015 |