Structure, function and diversity of the healthy human microbiome nature 486 (7402), 207-214, 2012 | 10197 | 2012 |
A framework for human microbiome research nature 486 (7402), 215-221, 2012 | 2406 | 2012 |
IMG: the integrated microbial genomes database and comparative analysis system VM Markowitz, IMA Chen, K Palaniappan, K Chu, E Szeto, Y Grechkin, ... Nucleic acids research 40 (D1), D115-D122, 2012 | 1409 | 2012 |
A phylogeny-driven genomic encyclopaedia of Bacteria and Archaea D Wu, P Hugenholtz, K Mavromatis, R Pukall, E Dalin, NN Ivanova, ... Nature 462 (7276), 1056-1060, 2009 | 1083 | 2009 |
Insights into secondary metabolism from a global analysis of prokaryotic biosynthetic gene clusters P Cimermancic, MH Medema, J Claesen, K Kurita, LCW Brown, ... Cell 158 (2), 412-421, 2014 | 956 | 2014 |
IMG ER: a system for microbial genome annotation expert review and curation VM Markowitz, K Mavromatis, NN Ivanova, IMA Chen, K Chu, ... Bioinformatics 25 (17), 2271-2278, 2009 | 947 | 2009 |
Microbial species delineation using whole genome sequences NJ Varghese, S Mukherjee, N Ivanova, KT Konstantinidis, K Mavrommatis, ... Nucleic acids research 43 (14), 6761-6771, 2015 | 698 | 2015 |
The Genomes OnLine Database (GOLD) v. 4: status of genomic and metagenomic projects and their associated metadata I Pagani, K Liolios, J Jansson, IMA Chen, T Smirnova, B Nosrat, ... Nucleic acids research 40 (D1), D571-D579, 2012 | 600 | 2012 |
IMG 4 version of the integrated microbial genomes comparative analysis system VM Markowitz, IMA Chen, K Palaniappan, K Chu, E Szeto, M Pillay, ... Nucleic acids research 42 (D1), D560-D567, 2014 | 595 | 2014 |
A bioinformatician's guide to metagenomics V Kunin, A Copeland, A Lapidus, K Mavromatis, P Hugenholtz Microbiology and molecular biology reviews 72 (4), 557-578, 2008 | 584 | 2008 |
Genomic and genetic analyses of diversity and plant interactions of Pseudomonas fluorescens MW Silby, AM Cerdeño-Tárraga, GS Vernikos, SR Giddens, RW Jackson, ... Genome biology 10, 1-16, 2009 | 480 | 2009 |
The integrated microbial genomes (IMG) system VM Markowitz, F Korzeniewski, K Palaniappan, E Szeto, G Werner, ... Nucleic acids research 34 (suppl_1), D344-D348, 2006 | 476 | 2006 |
The Genomes On Line Database (GOLD) in 2009: status of genomic and metagenomic projects and their associated metadata K Liolios, IMA Chen, K Mavromatis, N Tavernarakis, P Hugenholtz, ... Nucleic acids research 38 (suppl_1), D346-D354, 2010 | 463 | 2010 |
IMG/M: a data management and analysis system for metagenomes VM Markowitz, NN Ivanova, E Szeto, K Palaniappan, K Chu, D Dalevi, ... Nucleic acids research 36 (suppl_1), D534-D538, 2007 | 454 | 2007 |
The Genomes On Line Database (GOLD) in 2007: status of genomic and metagenomic projects and their associated metadata K Liolios, K Mavromatis, N Tavernarakis, NC Kyrpides Nucleic acids research 36 (suppl_1), D475-D479, 2007 | 446 | 2007 |
Identification of novel mutational drivers reveals oncogene dependencies in multiple myeloma BA Walker, K Mavrommatis, CP Wardell, TC Ashby, M Bauer, FE Davies, ... Blood, The Journal of the American Society of Hematology 132 (6), 587-597, 2018 | 418 | 2018 |
Use of simulated data sets to evaluate the fidelity of metagenomic processing methods K Mavromatis, N Ivanova, K Barry, H Shapiro, E Goltsman, AC McHardy, ... Nature methods 4 (6), 495-500, 2007 | 416 | 2007 |
A high-risk, Double-Hit, group of newly diagnosed myeloma identified by genomic analysis BA Walker, K Mavrommatis, CP Wardell, TC Ashby, M Bauer, F Davies, ... Leukemia 33 (1), 159-170, 2019 | 415 | 2019 |
The standard operating procedure of the DOE-JGI Microbial Genome Annotation Pipeline (MGAP v. 4) M Huntemann, NN Ivanova, K Mavromatis, HJ Tripp, D Paez-Espino, ... Standards in genomic sciences 10, 1-6, 2015 | 410 | 2015 |
The M5nr: a novel non-redundant database containing protein sequences and annotations from multiple sources and associated tools A Wilke, T Harrison, J Wilkening, D Field, EM Glass, N Kyrpides, ... BMC bioinformatics 13, 1-5, 2012 | 336 | 2012 |