| Extensive impact of non-antibiotic drugs on human gut bacteria L Maier, M Pruteanu, M Kuhn, G Zeller, A Telzerow, EE Anderson, ... Nature 555 (7698), 623-628, 2018 | 1693 | 2018 |
| Towards standards for human fecal sample processing in metagenomic studies PI Costea, G Zeller, S Sunagawa, E Pelletier, A Alberti, F Levenez, ... Nature biotechnology 35 (11), 1069-1076, 2017 | 748 | 2017 |
| Metabolic dependencies drive species co-occurrence in diverse microbial communities A Zelezniak, S Andrejev, O Ponomarova, DR Mende, P Bork, KR Patil Proceedings of the National Academy of Sciences 112 (20), 6449-6454, 2015 | 695 | 2015 |
| Uncovering transcriptional regulation of metabolism by using metabolic network topology KR Patil, J Nielsen Proceedings of the national academy of sciences 102 (8), 2685-2689, 2005 | 686 | 2005 |
| Evolutionary programming as a platform for in silico metabolic engineering KR Patil, I Rocha, J Förster, J Nielsen BMC bioinformatics 6, 1-12, 2005 | 555 | 2005 |
| Fast automated reconstruction of genome-scale metabolic models for microbial species and communities D Machado, S Andrejev, M Tramontano, KR Patil Nucleic acids research 46 (15), 7542-7553, 2018 | 486 | 2018 |
| OptFlux: an open-source software platform for in silico metabolic engineering I Rocha, P Maia, P Evangelista, P Vilaça, S Soares, JP Pinto, J Nielsen, ... BMC systems biology 4, 1-12, 2010 | 479 | 2010 |
| MEMOTE for standardized genome-scale metabolic model testing C Lieven, ME Beber, BG Olivier, FT Bergmann, M Ataman, P Babaei, ... Nature biotechnology 38 (3), 272-276, 2020 | 406* | 2020 |
| The metabolic response of heterotrophic Arabidopsis cells to oxidative stress CJ Baxter, H Redestig, N Schauer, D Repsilber, KR Patil, J Nielsen, ... Plant physiology 143 (1), 312-325, 2007 | 318 | 2007 |
| Yeast creates a niche for symbiotic lactic acid bacteria through nitrogen overflow O Ponomarova, N Gabrielli, DC Sévin, M Mülleder, K Zirngibl, K Bulyha, ... Cell systems 5 (4), 345-357. e6, 2017 | 305 | 2017 |
| Improved vanillin production in baker's yeast through in silico design AR Brochado, C Matos, BL Møller, J Hansen, UH Mortensen, KR Patil Microbial cell factories 9, 1-15, 2010 | 303 | 2010 |
| Metabolic interactions in microbial communities: untangling the Gordian knot O Ponomarova, KR Patil Current opinion in microbiology 27, 37-44, 2015 | 270 | 2015 |
| Enhancing sesquiterpene production in Saccharomyces cerevisiae through in silico driven metabolic engineering MA Asadollahi, J Maury, KR Patil, M Schalk, A Clark, J Nielsen Metabolic engineering 11 (6), 328-334, 2009 | 254 | 2009 |
| Nutritional preferences of human gut bacteria reveal their metabolic idiosyncrasies M Tramontano, S Andrejev, M Pruteanu, M Klünemann, M Kuhn, ... Nature microbiology 3 (4), 514-522, 2018 | 233 | 2018 |
| Industrial Systems Biology of Saccharomyces cerevisiae Enables Novel Succinic Acid Cell Factory JM Otero, D Cimini, KR Patil, SG Poulsen, L Olsson, J Nielsen PloS one 8 (1), e54144, 2013 | 218 | 2013 |
| Unravelling the collateral damage of antibiotics on gut bacteria L Maier, CV Goemans, J Wirbel, M Kuhn, C Eberl, M Pruteanu, P Müller, ... Nature 599 (7883), 120-124, 2021 | 216 | 2021 |
| Bioaccumulation of therapeutic drugs by human gut bacteria M Klünemann, S Andrejev, S Blasche, A Mateus, P Phapale, ... Nature 597 (7877), 533-538, 2021 | 208 | 2021 |
| Use of genome-scale microbial models for metabolic engineering KR Patil, M Åkesson, J Nielsen Current opinion in biotechnology 15 (1), 64-69, 2004 | 207 | 2004 |
| Metabolic cooperation and spatiotemporal niche partitioning in a kefir microbial community S Blasche, Y Kim, RAT Mars, D Machado, M Maansson, E Kafkia, ... Nature Microbiology, 1-13, 2021 | 200 | 2021 |
| Polarization of microbial communities between competitive and cooperative metabolism D Machado, OM Maistrenko, S Andrejev, Y Kim, P Bork, KR Patil, KR Patil Nature ecology & evolution 5 (2), 195-203, 2021 | 170 | 2021 |
Jens NielsenProfessor in Systems Biology, Chalmers University of Technology, Sweden在 chalmers.se 的电子邮件经过验证
