Connecting structure to function with the recovery of over 1000 high-quality metagenome-assembled genomes from activated sludge using long-read sequencing CM Singleton, F Petriglieri, JM Kristensen, RH Kirkegaard, TY Michaelsen, ... Nature Communications 12 (1), 1-13, 2021 | 227* | 2021 |
The impact of immigration on microbial community composition in full-scale anaerobic digesters RH Kirkegaard, SJ McIlroy, JM Kristensen, M Nierychlo, SM Karst, ... Scientific reports 7 (1), 1-11, 2017 | 177 | 2017 |
MiDAS 2.0: an ecosystem-specific taxonomy and online database for the organisms of wastewater treatment systems expanded for anaerobic digester groups SJ McIlroy, RH Kirkegaard, B McIlroy, M Nierychlo, JM Kristensen, ... Database 2017 (1), 2017 | 173 | 2017 |
Generation of Comprehensive Ecosystem-Specific Reference Databases with Species-Level Resolution by High-Throughput Full-Length 16S rRNA Gene Sequencing and Automated Taxonomy … MS Dueholm, KS Andersen, SJ McIlroy, JM Kristensen, E Yashiro, ... mBio 11 (5), 2020 | 100* | 2020 |
Bacteria from the genus Arcobacter are abundant in effluent from wastewater treatment plants JM Kristensen, M Nierychlo, M Albertsen, PH Nielsen Applied and Environmental Microbiology 86 (9), 2020 | 84 | 2020 |
High diversity and functional potential of undescribed “Acidobacteriota” in Danish wastewater treatment plants JM Kristensen, CM Singleton, LA Clegg, F Petriglieri, PH Nielsen Frontiers in Microbiology 12, 906, 2021 | 82 | 2021 |
Mass-immigration determines the assembly of activated sludge microbial communities G Dottorini, TY Michaelsen, S Kucheryavskiy, KS Andersen, ... Proceedings of the National Academy of Sciences 118 (27), 2021 | 61 | 2021 |
Genomic and in situ analyses reveal the Micropruina spp. as abundant fermentative glycogen accumulating organisms in enhanced biological phosphorus removal systems SJ McIlroy, CA Onetto, B McIlroy, FA Herbst, MS Dueholm, RH Kirkegaard, ... Frontiers in microbiology 9, 1004, 2018 | 48 | 2018 |
Connecting structure to function with the recovery of over 1000 high-quality metagenome-assembled genomes from activated sludge using long-read sequencing. Nat Commun 12: 2009 CM Singleton, F Petriglieri, JM Kristensen, RH Kirkegaard, TY Michaelsen, ... | 23 | 2021 |
A refined set of rRNA-targeted oligonucleotide probes for in situ detection and quantification of ammonia-oxidizing bacteria M Lukumbuzya, JM Kristensen, K Kitzinger, A Pommerening-Röser, ... Water Research 186, 116372, 2020 | 23 | 2020 |
Global abundance patterns, diversity, and ecology of Patescibacteria in wastewater treatment plants H Hu, JM Kristensen, CW Herbold, P Pjevac, K Kitzinger, B Hausmann, ... Microbiome 12 (1), 55, 2024 | 3 | 2024 |
Global reference database of microbes in anaerobic digesters VR Jørgensen, MS Dueholm, S Knutsson, MA Nierychlo, JM Kristensen, ... IWC-16th World Conference on Anaerobic Digestion, 2019 | 2 | 2019 |
The Parkinson's drug entacapone disrupts gut microbiome homeostasis via iron sequestration FC Pereira, X Ge, JM Kristensen, RH Kirkegaard, K Maritsch, Y Zu, ... bioRxiv, 2023.11. 12.566429, 2023 | 1 | 2023 |
Species-level diversity of the filamentous Candidatus Microthrix in Danish full-scale WWTPs and their influence on sludge settling properties MA Nierychlo, L Thomsen, KS Andersen, M Dueholm, F Petriglieri, ... 8th IWA Microbial Ecology and Water Engineering Specialist Conference, 2019 | 1 | 2019 |
Global database of microbes in wastewater treatment systems VR Jørgensen, MS Dueholm, S Knutsson, M Nierychlo, JM Kristensen, ... 17th International Symposium on Microbial Ecology, 2018 | 1 | 2018 |
Effluent from Wastewater Treatment Plants: Microbial water quality measured by 16S rRNA Amplicon Sequencing JM Kristensen, M Nierychlo, M Albertsen, PH Nielsen 11th Annual meeting in Danish Water Forum, 2017 | 1 | 2017 |
Influent pathogenic bacteria may go straight into effluent in full scale wastewater treatment plants JM Kristensen, M Nierychlo, M Albertsen, PH Nielsen Microbial Ecology & Water Engineering and Biofilm IWA Specialist Conference, 2016 | 1 | 2016 |
Generation of comprehensive ecosystems-specific reference databases with species-level resolution by high-throughput full-length 16S rRNA gene sequencing and automated taxonomy … MS Dueholm, KS Andersen, SJ McIlroy, JM Kristensen, E Yashiro, ... bioRxiv, 672873, 2020 | | 2020 |
Generation of comprehensive ecosystems-specific reference databases with species-level resolution by high-throughput full-length 16S rRNA gene sequencing and automated taxonomy … MS Dueholm, KS Andersen, SJ McIlroy, JM Kristensen, E Yashiro, ... | | 2019 |
Extensive and High Quality Genome Recovery from full-scale WWTPs using Nanopore Sequencing CM Singleton, MH Andersen, RH Kirkegaard, JM Kristensen, ... 8th IWA Microbial Ecology and Water Engineering Specialist Conference, 2019 | | 2019 |