| Spatially informed clustering, integration, and deconvolution of spatial transcriptomics with GraphST Y Long, KS Ang, M Li, KLK Chong, R Sethi, C Zhong, H Xu, Z Ong, ... Nature Communications 14 (1), 1155, 2023 | 173 | 2023 |
| Unsupervised spatially embedded deep representation of spatial transcriptomics H Xu, H Fu, Y Long, KS Ang, R Sethi, K Chong, M Li, R Uddamvathanak, ... Genome Medicine 16 (1), 12, 2024 | 140 | 2024 |
| QTLbase: an integrative resource for quantitative trait loci across multiple human molecular phenotypes Z Zheng, D Huang, J Wang, K Zhao, Y Zhou, Z Guo, S Zhai, H Xu, H Cui, ... Nucleic acids research 48 (D1), D983-D991, 2020 | 115 | 2020 |
| C-terminal truncated HBx initiates hepatocarcinogenesis by downregulating TXNIP and reprogramming glucose metabolism Y Zhang, Q Yan, L Gong, H Xu, B Liu, X Fang, D Yu, L Li, T Wei, Y Wang, ... Oncogene 40 (6), 1147-1161, 2021 | 65 | 2021 |
| regBase: whole genome base-wise aggregation and functional prediction for human non-coding regulatory variants S Zhang, Y He, H Liu, H Zhai, D Huang, X Yi, X Dong, Z Wang, K Zhao, ... Nucleic acids research 47 (21), e134-e134, 2019 | 52 | 2019 |
| Molecular characterization of colorectal adenomas with and without malignancy reveals distinguishing genome, transcriptome and methylome alterations BR Druliner, P Wang, T Bae, S Baheti, S Slettedahl, D Mahoney, ... Scientific reports 8 (1), 3161, 2018 | 49 | 2018 |
| Exploring 3D chromatin contacts in gene regulation: the evolution of approaches for the identification of functional enhancer-promoter interaction H Xu, S Zhang, X Yi, D Plewczynski, MJ Li Computational and structural biotechnology journal 18, 558-570, 2020 | 43 | 2020 |
| Ultrafast and scalable variant annotation and prioritization with big functional genomics data D Huang, X Yi, Y Zhou, H Yao, H Xu, J Wang, S Zhang, W Nong, P Wang, ... Genome research 30 (12), 1789-1801, 2020 | 24 | 2020 |
| mTCTScan: a comprehensive platform for annotation and prioritization of mutations affecting drug sensitivity in cancers MJ Li, H Yao, D Huang, H Liu, Z Liu, H Xu, Y Qin, J Prinz, W Xia, P Wang, ... Nucleic acids research 45 (W1), W215-W221, 2017 | 12 | 2017 |
| Deciphering spatial domains from spatial multi-omics with SpatialGlue Y Long, KS Ang, R Sethi, S Liao, Y Heng, L van Olst, S Ye, C Zhong, H Xu, ... Nature Methods, 1-10, 2024 | 9 | 2024 |
| Interrogating cell type-specific cooperation of transcriptional regulators in 3D chromatin X Yi, Z Zheng, H Xu, Y Zhou, D Huang, J Wang, X Feng, K Zhao, X Fan, ... Iscience 24 (12), 2021 | 4 | 2021 |
| Inferring CTCF-binding patterns and anchored loops across human tissues and cell types H Xu, X Yi, X Fan, C Wu, W Wang, X Chu, S Zhang, X Dong, Z Wang, ... Patterns 4 (8), 2023 | 2 | 2023 |
| Single-cell and spatial atlas of steatotic liver-related hepatocellular carcinoma A Prawira, H Xu, WQ Leow, M Otsuka, Z Chen, M Rahbari, SN Hazirah, ... bioRxiv, 2024.05. 09.593073, 2024 | 1 | 2024 |
Mulin Jun LiTianjin Medical University在 fas.harvard.edu 的电子邮件经过验证
