G4Hunter web application: a web server for G-quadruplex prediction V Brázda, J Kolomazník, J Lýsek, M Bartas, M Fojta, J Šťastný, JL Mergny Bioinformatics 35 (18), 3493-3495, 2019 | 167 | 2019 |
The presence and localization of G-quadruplex forming sequences in the domain of bacteria M Bartas, M Čutová, V Brázda, P Kaura, J Šťastný, J Kolomazník, J Coufal, ... Molecules 24 (9), 1711, 2019 | 88 | 2019 |
In-Depth Bioinformatic Analyses of Nidovirales Including Human SARS-CoV-2, SARS-CoV, MERS-CoV Viruses Suggest Important Roles of Non-canonical Nucleic … M Bartas, V Brázda, N Bohálová, A Cantara, A Volná, T Stachurová, ... Frontiers in microbiology 11, 1583, 2020 | 64 | 2020 |
The amino acid composition of quadruplex binding proteins reveals a shared motif and predicts new potential quadruplex interactors V Brázda, J Červeň, M Bartas, N Mikysková, J Coufal, P Pečinka Molecules 23 (9), 2341, 2018 | 63 | 2018 |
Large expert-curated database for benchmarking document similarity detection in biomedical literature search P Brown, AC Tan, MA El-Esawi, T Liehr, O Blanck, DP Gladue, ... Database 2019, 2019 | 36 | 2019 |
Evolution of diverse strategies for promoter regulation V Brázda, M Bartas, RP Bowater Trends in Genetics 37 (8), 730-744, 2021 | 35 | 2021 |
Analyses of viral genomes for G-quadruplex forming sequences reveal their correlation with the type of infection N Bohálová, A Cantara, M Bartas, P Kaura, J Šťastný, P Pečinka, M Fojta, ... Biochimie 186, 13-27, 2021 | 35 | 2021 |
Complex analyses of inverted repeats in mitochondrial genomes revealed their importance and variability J Čechová, J Lýsek, M Bartas, V Brázda Bioinformatics 34 (7), 1081-1085, 2018 | 35 | 2018 |
G-Quadruplexes in the archaea domain V Brázda, Y Luo, M Bartas, P Kaura, O Porubiaková, J Šťastný, P Pečinka, ... Biomolecules 10 (9), 1349, 2020 | 34 | 2020 |
SARS-CoV-2 hot-spot mutations are significantly enriched within inverted repeats and CpG island loci P Goswami, M Bartas, M Lexa, N Bohálová, A Volná, J Červeň, ... Briefings in Bioinformatics 22 (2), 1338-1345, 2021 | 28 | 2021 |
Divergent distributions of inverted repeats and G-quadruplex forming sequences in Saccharomyces cerevisiae M Čutová, J Manta, O Porubiaková, P Kaura, J Šťastný, EB Jagelská, ... Genomics 112 (2), 1897-1901, 2020 | 28 | 2020 |
Unheeded SARS-CoV-2 proteins? A deep look into negative-sense RNA M Bartas, A Volná, CA Beaudoin, ET Poulsen, J Červeň, V Brázda, ... Briefings in bioinformatics 23 (3), bbac045, 2022 | 27 | 2022 |
Complex analyses of short inverted repeats in all sequenced chloroplast DNAs V Brázda, J Lýsek, M Bartas, M Fojta BioMed research international 2018 (1), 1097018, 2018 | 26 | 2018 |
G-quadruplexes in H1N1 influenza genomes V Brázda, O Porubiaková, A Cantara, N Bohálová, J Coufal, M Bartas, ... BMC genomics 22, 1-11, 2021 | 24 | 2021 |
Beta-lactam resistance development during the treatment processes of municipal wastewater treatment plants T Stachurová, H Piková, M Bartas, J Semerád, K Svobodová, ... Chemosphere 280, 130749, 2021 | 22 | 2021 |
Bioinformatics analyses and in vitro evidence for five and six stacked G-quadruplex forming sequences M Bartas, V Brázda, V Karlický, J Červeň, P Pečinka Biochimie 150, 70-75, 2018 | 21 | 2018 |
Amino acid composition in various types of nucleic acid-binding proteins M Bartas, J Červeň, S Guziurová, K Slychko, P Pečinka International Journal of Molecular Sciences 22 (2), 922, 2021 | 20 | 2021 |
Tracing dsDNA virus–host coevolution through correlation of their G-Quadruplex-Forming sequences N Bohálová, A Cantara, M Bartas, P Kaura, J Šťastný, P Pečinka, M Fojta, ... International Journal of Molecular Sciences 22 (7), 3433, 2021 | 18 | 2021 |
Regulation of phenolic compound production by light varying in spectral quality and total irradiance R Pech, A Volná, L Hunt, M Bartas, J Červeň, P Pečinka, V Špunda, ... International Journal of Molecular Sciences 23 (12), 6533, 2022 | 17 | 2022 |
G-Quadruplex in Gene Encoding Large Subunit of Plant RNA Polymerase II: A Billion-Year-Old Story A Volná, M Bartas, V Karlický, J Nezval, K Kundrátová, P Pečinka, ... International Journal of Molecular Sciences 22 (14), 7381, 2021 | 16 | 2021 |