Factor graphs and the sum-product algorithm FR Kschischang, BJ Frey, HA Loeliger IEEE Transactions on information theory 47 (2), 498-519, 2001 | 8511 | 2001 |
Clustering by passing messages between data points BJ Frey, D Dueck science 315 (5814), 972-976, 2007 | 8078 | 2007 |
Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing Q Pan, O Shai, LJ Lee, BJ Frey, BJ Blencowe Nature genetics 40 (12), 1413-1415, 2008 | 4392 | 2008 |
Adversarial autoencoders A Makhzani, J Shlens, N Jaitly, I Goodfellow, B Frey arXiv preprint arXiv:1511.05644, 2015 | 3258 | 2015 |
Predicting the sequence specificities of DNA-and RNA-binding proteins by deep learning B Alipanahi, A Delong, MT Weirauch, BJ Frey Nature biotechnology 33 (8), 831-838, 2015 | 2981 | 2015 |
The" wake-sleep" algorithm for unsupervised neural networks GE Hinton, P Dayan, BJ Frey, RM Neal Science 268 (5214), 1158-1161, 1995 | 1543 | 1995 |
A compendium of RNA-binding motifs for decoding gene regulation D Ray, H Kazan, KB Cook, MT Weirauch, HS Najafabadi, X Li, ... Nature 499 (7457), 172-177, 2013 | 1514 | 2013 |
The human splicing code reveals new insights into the genetic determinants of disease HY Xiong, B Alipanahi, LJ Lee, H Bretschneider, D Merico, RKC Yuen, ... Science 347 (6218), 1254806, 2015 | 1409 | 2015 |
The evolutionary landscape of alternative splicing in vertebrate species NL Barbosa-Morais, M Irimia, Q Pan, HY Xiong, S Gueroussov, LJ Lee, ... Science 338 (6114), 1587-1593, 2012 | 1127 | 2012 |
Deciphering the splicing code Y Barash, JA Calarco, W Gao, Q Pan, X Wang, O Shai, BJ Blencowe, ... Nature 465 (7294), 53-59, 2010 | 1107 | 2010 |
Graphical models for machine learning and digital communication BJ Frey MIT press, 1998 | 840 | 1998 |
Whole genome sequencing resource identifies 18 new candidate genes for autism spectrum disorder RK C Yuen, D Merico, M Bookman, J L Howe, B Thiruvahindrapuram, ... Nature neuroscience 20 (4), 602-611, 2017 | 775 | 2017 |
Widespread intron retention in mammals functionally tunes transcriptomes U Braunschweig, NL Barbosa-Morais, Q Pan, EN Nachman, B Alipanahi, ... Genome research 24 (11), 1774-1786, 2014 | 672 | 2014 |
Deep learning of the tissue-regulated splicing code MKK Leung, HY Xiong, LJ Lee, BJ Frey Bioinformatics 30 (12), i121-i129, 2014 | 607 | 2014 |
Iterative decoding of compound codes by probability propagation in graphical models FR Kschischang, BJ Frey IEEE Journal on Selected Areas in Communications 16 (2), 219-230, 1998 | 585 | 1998 |
Exploring the mode-of-action of bioactive compounds by chemical-genetic profiling in yeast AB Parsons, A Lopez, IE Givoni, DE Williams, CA Gray, J Porter, G Chua, ... Cell 126 (3), 611-625, 2006 | 560 | 2006 |
Global survey of organ and organelle protein expression in mouse: combined proteomic and transcriptomic profiling T Kislinger, B Cox, A Kannan, C Chung, P Hu, A Ignatchenko, MS Scott, ... Cell 125 (1), 173-186, 2006 | 550 | 2006 |
Deep learning in biomedicine M Wainberg, D Merico, A Delong, BJ Frey Nature biotechnology 36 (9), 829-838, 2018 | 542 | 2018 |
A revolution: Belief propagation in graphs with cycles BJ Frey, D MacKay Advances in neural information processing systems 10, 1997 | 499 | 1997 |
Classifying and segmenting microscopy images with deep multiple instance learning OZ Kraus, JL Ba, BJ Frey Bioinformatics 32 (12), i52-i59, 2016 | 484 | 2016 |