| Robust single-cell Hi-C clustering by convolution-and random-walk–based imputation J Zhou, J Ma, Y Chen, C Cheng, B Bao, J Peng, TJ Sejnowski, JR Dixon, ... Proceedings of the National Academy of Sciences 116 (28), 14011-14018, 2019 | 129 | 2019 |
| Elucidating Human Milk Oligosaccharide biosynthetic genes through network-based multi-omics integration BP Kellman, A Richelle, JY Yang, D Chapla, AWT Chiang, JA Najera, ... Nature communications 13 (1), 2455, 2022 | 41 | 2022 |
| Large scale validation of an early-age eye-tracking biomarker of an autism spectrum disorder subtype TH Wen, A Cheng, C Andreason, J Zahiri, Y Xiao, R Xu, B Bao, ... Scientific reports 12 (1), 4253, 2022 | 37 | 2022 |
| Correcting for sparsity and interdependence in glycomics by accounting for glycan biosynthesis B Bao, BP Kellman, AWT Chiang, Y Zhang, JT Sorrentino, AK York, ... Nature communications 12 (1), 4988, 2021 | 31 | 2021 |
| A fast and flexible framework for network-assisted genomic association DE Carlin, SH Fong, Y Qin, T Jia, JK Huang, B Bao, C Zhang, T Ideker Iscience 16, 155-161, 2019 | 28 | 2019 |
| A Markov model of glycosylation elucidates isozyme specificity and glycosyltransferase interactions for glycoengineering C Liang, AWT Chiang, AH Hansen, J Arnsdorf, S Schoffelen, ... Current research in biotechnology 2, 22-36, 2020 | 22 | 2020 |
| A consensus-based and readable extension of Linear Code for Reaction Rules (LiCoRR) BP Kellman, Y Zhang, E Logomasini, E Meinhardt, KP Godinez-Macias, ... Beilstein journal of organic chemistry 16 (1), 2645-2662, 2020 | 17 | 2020 |
| Identification and Characterization of Two Novel blaKLUC Resistance Genes through Large-Scale Resistance Plasmids Sequencing T Xu, J Ying, X Yao, Y Song, P Ma, B Bao, W Jiang, X Wu, H Tou, P Li, ... Public Library of Science 7 (10), e47197, 2012 | 13 | 2012 |
| Molecular variation and horizontal gene transfer of the homocysteine methyltransferase gene mmuM and its distribution in clinical pathogens J Ying, H Wang, B Bao, Y Zhang, J Zhang, C Zhang, A Li, J Lu, P Li, ... International Journal of Biological Sciences 11 (1), 11, 2015 | 10 | 2015 |
| Systems glycobiology for discovering drug targets, biomarkers, and rational designs for glyco-immunotherapy AWT Chiang, HM Baghdassarian, BP Kellman, B Bao, JT Sorrentino, ... Journal of biomedical science 28, 1-15, 2021 | 8 | 2021 |
| Strategies for network GWAS evaluated using classroom crowd science SH Fong, DE Carlin, K Ozturk, N Arang, B Bao, H Bennett, X Cai, K Chau, ... Cell systems 8 (4), 275-280, 2019 | 6 | 2019 |
| A predictive ensemble classifier for the gene expression diagnosis of ASD at ages 1 to 4 years B Bao, J Zahiri, VH Gazestani, L Lopez, Y Xiao, R Kim, TH Wen, ... Molecular psychiatry 28 (2), 822-833, 2023 | 4 | 2023 |
| Preparing glycomics data for robust statistical analysis with GlyCompareCT Y Zhang, S Krishnan, B Bao, AWT Chiang, JT Sorrentino, SM Schinn, ... STAR protocols 4 (2), 102162, 2023 | 2 | 2023 |
| Systems Glycoengineering: Integrated Analyses of Glycomics, Transcriptomics and Phenotypic Data Reveal Complex Cellular Response to Glycoengineering in CHO Cells WT Chiang, VH Gazestani, B Bao, C Liang, JT Sorrention, BP Kellman, ... The FASEB Journal 34 (S1), 1-1, 2020 | 1 | 2020 |
| Decoding glycosylation potential from protein structure across human glycoproteins with a multi-view recurrent neural network BP Kellman, J Mariethoz, Y Zhang, S Shaul, M Alteri, D Sandoval, ... bioRxiv, 2024 | | 2024 |
| Protein structure, a genetic encoding for glycosylation BP Kellman, D Sandoval, OO Zaytseva, K Brock, S Baboo, ... bioRxiv, 2024.05. 15.594261, 2024 | | 2024 |
| Transfer learning improves outcome predictions for ASD from gene expression in blood K Robasky, R Kim, H Yi, H Xu, B Bao, AWT Chiang, E Courchesne, ... bioRxiv, 2021.06. 26.449864, 2021 | | 2021 |
| A consensus-based and readable extension ofLinearCode forReactionRules (LiCoRR) BP Kellman, Y Zhang, E Logomasini, E Meinhardt, AWT Chiang, ... | | 2020 |
| Elucidate Glycosyltransferase Specificities And Interactions for Rational Glycoengineering C Liang, AWT Chiang, AH Hansen, J Arnsdorf, S Schoffelen, ... The FASEB Journal 34 (S1), 1-1, 2020 | | 2020 |
| Current Research in Biotechnology JT Sorrentino, BP Kellman, B Bao, BG Voldborg, NE Lewis | | 2020 |
