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| COPASI and its applications in biotechnology FT Bergmann, S Hoops, B Klahn, U Kummer, P Mendes, J Pahle, S Sahle Journal of biotechnology 261, 215-220, 2017 | 96 | 2017 |
| Identification of protein disulfide isomerase as an endothelial hypoxic stress protein KK Graven, C Molvar, JS Roncarati, BD Klahn, S Lowrey, HW Farber American Journal of Physiology-Lung Cellular and Molecular Physiology 282 (5 …, 2002 | 67 | 2002 |
| HIF-2α regulates glyceraldehyde-3-phosphate dehydrogenase expression in endothelial cells KK Graven, D Bellur, BD Klahn, SL Lowrey, E Amberger Biochimica et Biophysica Acta (BBA)-Gene Structure and Expression 1626 (1-3 …, 2003 | 48 | 2003 |
| Projected resurgence of COVID-19 in the United States in July—December 2021 resulting from the increased transmissibility of the Delta variant and faltering vaccination S Truelove, CP Smith, M Qin, LC Mullany, RK Borchering, J Lessler, ... Elife 11, e73584, 2022 | 40 | 2022 |
| Evaluating the impact of international airline suspensions on the early global spread of COVID-19 A Adiga, S Venkatramanan, J Schlitt, A Peddireddy, A Dickerman, A Bura, ... Medrxiv, 2020 | 37 | 2020 |
| Impact of SARS-CoV-2 vaccination of children ages 5–11 years on COVID-19 disease burden and resilience to new variants in the United States, November 2021–March 2022: A multi … RK Borchering, LC Mullany, E Howerton, M Chinazzi, CP Smith, M Qin, ... The Lancet Regional Health–Americas 17, 2023 | 28 | 2023 |
| From 5vs to 6cs: Operationalizing epidemic data management with covid-19 surveillance AS Peddireddy, D Xie, P Patil, ML Wilson, D Machi, S Venkatramanan, ... 2020 IEEE International Conference on Big Data (Big Data), 1380-1387, 2020 | 21 | 2020 |
| Evaluating the impact of international airline suspensions on COVID-19 direct importation risk A Adiga, S Venkatramanan, A Peddireddy, A Telionis, A Dickerman, ... medRxiv, 2020.02. 20.20025882, 2020 | 16 | 2020 |
| Data-driven scalable pipeline using national agent-based models for real-time pandemic response and decision support P Bhattacharya, J Chen, S Hoops, D Machi, B Lewis, S Venkatramanan, ... The International Journal of High Performance Computing Applications 37 (1 …, 2023 | 15 | 2023 |
| Evaluation of the US COVID-19 Scenario Modeling Hub for informing pandemic response under uncertainty E Howerton, L Contamin, LC Mullany, M Qin, NG Reich, S Bents, ... Nature communications 14 (1), 7260, 2023 | 11 | 2023 |
| Ai-driven agent-based models to study the role of vaccine acceptance in controlling covid-19 spread in the us P Bhattacharya, D Machi, J Chen, S Hoops, B Lewis, H Mortveit, ... 2021 IEEE International Conference on Big Data (Big Data), 1566-1574, 2021 | 9 | 2021 |
| Informing pandemic response in the face of uncertainty. An evaluation of the US COVID-19 Scenario Modeling Hub E Howerton, L Contamin, LC Mullany, M Qin, NG Reich, S Bents, ... medRxiv, 2023 | 8 | 2023 |
| Informing pandemic response in the face of uncertainty E Howerton, L Contamin, LC Mullany, M Qin, NG Reich, S Bents, ... An evaluation of the US COVID-19 Scenario Modeling Hub, 2023 | 5 | 2023 |
| Evaluating the impact of international airline suspensions on the early global spread of COVID-19. medRxiv A Adiga, S Venkatramanan, J Schlitt, A Peddireddy, A Dickerman, A Bura, ... Preprint]. doi 10 (2020), 02.20, 2020 | 5 | 2020 |
| Draft genome sequences of two Campylobacter jejuni clinical isolates, NW and D2600 JP Jerome, BD Klahn, JA Bell, JE Barrick, CT Brown, LS Mansfield Journal of bacteriology 194 (20), 5707-5708, 2012 | 4 | 2012 |
| Data-driven mechanistic framework with stratified immunity and effective transmissibility for COVID-19 scenario projections P Porebski, S Venkatramanan, A Adiga, B Klahn, B Hurt, ML Wilson, ... Epidemics 47, 100761, 2024 | 2 | 2024 |
| Potential impact of annual vaccination with reformulated COVID-19 vaccines: lessons from the US COVID-19 Scenario Modeling Hub S Jung, SL Loo, E Howerton, L Contamin, CP Smith, EC Carcelén, K Yan, ... Plos Medicine 21 (4), e1004387, 2024 | 2 | 2024 |
| Novel multi-cluster workflow system to support real-time HPC-enabled epidemic science: Investigating the impact of vaccine acceptance on COVID-19 spread P Bhattacharya, D Machi, J Chen, S Hoops, B Lewis, H Mortveit, ... Journal of Parallel and Distributed Computing 191, 104899, 2024 | | 2024 |
| Computational Modeling of Immune System Interactions during Cytokine Release Syndrome (CRS) and Immune Effector Cell Associated Neurotoxicity Syndrome (ICANS) after Chimeric … A Winger, B Klahn, A Warren, S Hoops, M Marathe, DW Lee, ... 2022 Tandem Meetings| Transplantation & Cellular Therapy Meetings of ASTCT …, 2022 | | 2022 |
