Molecular profiling reveals biologically discrete subsets and pathways of progression in diffuse glioma M Ceccarelli, FP Barthel, TM Malta, TS Sabedot, SR Salama, BA Murray, ... Cell 164 (3), 550-563, 2016 | 2019 | 2016 |
Proteogenomic and metabolomic characterization of human glioblastoma LB Wang, A Karpova, MA Gritsenko, JE Kyle, S Cao, Y Li, D Rykunov, ... Cancer cell 39 (4), 509-528. e20, 2021 | 414 | 2021 |
TCGA Workflow: Analyze cancer genomics and epigenomics data using Bioconductor packages TC Silva, A Colaprico, C Olsen, F D'Angelo, G Bontempi, M Ceccarelli, ... F1000Research 5, 2016 | 241 | 2016 |
Proteogenomic insights into the biology and treatment of HPV-negative head and neck squamous cell carcinoma C Huang, L Chen, SR Savage, RV Eguez, Y Dou, Y Li, ... Cancer Cell, 2021 | 231 | 2021 |
Glioma progression is shaped by genetic evolution and microenvironment interactions FS Varn, KC Johnson, J Martinek, JT Huse, MLP Nasrallah, P Wesseling, ... Cell 185 (12), 2184-2199. e16, 2022 | 225 | 2022 |
Pathway-based classification of glioblastoma uncovers a mitochondrial subtype with therapeutic vulnerabilities L Garofano, S Migliozzi, YT Oh, F D’Angelo, RD Najac, A Ko, B Frangaj, ... Nature Cancer, 1-16, 2021 | 212 | 2021 |
The molecular landscape of glioma in patients with Neurofibromatosis 1 F D’Angelo, M Ceccarelli, Tala, L Garofano, J Zhang, V Frattini, FP Caruso, ... Nature medicine 25 (1), 176-187, 2019 | 173 | 2019 |
Evaluation of low doses BPA-induced perturbation of glycemia by toxicogenomics points to a primary role of pancreatic islets and to the mechanism of toxicity E Carchia, I Porreca, PJ Almeida, F D'angelo, D Cuomo, M Ceccarelli, ... Cell death & disease 6 (10), e1959-e1959, 2015 | 74 | 2015 |
A map of tumor–host interactions in glioma at single-cell resolution FP Caruso, L Garofano, F D'Angelo, K Yu, F Tang, J Yuan, J Zhang, ... Gigascience 9 (10), giaa109, 2020 | 42 | 2020 |
“Stockpile” of slight transcriptomic changes determines the indirect genotoxicity of low-dose BPA in thyroid cells I Porreca, L Ulloa Severino, F D’Angelo, D Cuomo, M Ceccarelli, L Altucci, ... PloS one 11 (3), e0151618, 2016 | 39 | 2016 |
Transcriptional landscape of mouse-aged ovaries reveals a unique set of non-coding RNAs associated with physiological and environmental ovarian dysfunctions D Cuomo, I Porreca, M Ceccarelli, DW Threadgill, WT Barrington, ... Cell death discovery 4 (1), 112, 2018 | 28 | 2018 |
Proline hydroxylation primes protein kinases for autophosphorylation and activation SB Lee, A Ko, YT Oh, P Shi, F D’Angelo, B Frangaj, A Koller, EI Chen, ... Molecular cell 79 (3), 376-389. e8, 2020 | 27 | 2020 |
Pesticide toxicogenomics across scales: in vitro transcriptome predicts mechanisms and outcomes of exposure in vivo. I Porreca, F D'Angelo, LD Franceschi, A Mattè, M Ceccarelli, A Iolascon, ... Scientific Reports 6, 2016 | 26 | 2016 |
Integrative multi-omics networks identify PKCδ and DNA-PK as master kinases of glioblastoma subtypes and guide targeted cancer therapy S Migliozzi, YT Oh, M Hasanain, L Garofano, F D’angelo, RD Najac, ... Nature cancer 4 (2), 181-202, 2023 | 23 | 2023 |
Changes of the hepatic proteome in hepatitis B-infected mouse model at early stages of fibrosis D Spano, F Cimmino, M Capasso, F D’Angelo, N Zambrano, ... Journal of proteome research 7 (7), 2642-2653, 2008 | 19 | 2008 |
Temporospatial genomic profiling in glioblastoma identifies commonly altered core pathways underlying tumor progression MR Blomquist, SF Ensign, F D’Angelo, JJ Phillips, M Ceccarelli, S Peng, ... Neuro-oncology advances 2 (1), vdaa078, 2020 | 18 | 2020 |
Modulation of Nogo receptor 1 expression orchestrates myelin-associated infiltration of glioblastoma JH Hong, S Kang, JK Sa, G Park, YT Oh, TH Kim, J Yin, SS Kim, ... Brain 144 (2), 636-654, 2021 | 17 | 2021 |
Dysregulation of principal cell miRNAs facilitates epigenetic regulation of AQP2 and results in nephrogenic diabetes insipidus F Petrillo, A Iervolino, T Angrisano, S Jelen, V Costanzo, M D’Acierno, ... Journal of the American Society of Nephrology 32 (6), 1339-1354, 2021 | 16 | 2021 |
Differential community detection in paired biological networks R Mall, E Ullah, K Kunji, F D'Angelo, H Bensmail, M Ceccarelli Proceedings of the 8th ACM International Conference on Bioinformatics …, 2017 | 16 | 2017 |
Centrosome linker–induced tetraploid segregation errors link rhabdoid phenotypes and lethal colorectal cancers A Remo, E Manfrin, P Parcesepe, A Ferrarini, HS Han, U Mickys, ... Molecular Cancer Research 16 (9), 1385-1395, 2018 | 14 | 2018 |