SpaceM reveals metabolic states of single cells L Rappez, M Stadler, S Triana, RM Gathungu, K Ovchinnikova, P Phapale, ... Nature methods 18 (7), 799-805, 2021 | 234* | 2021 |
Omnipose: a high-precision morphology-independent solution for bacterial cell segmentation KJ Cutler, C Stringer, TW Lo, L Rappez, N Stroustrup, S Brook Peterson, ... Nature methods 19 (11), 1438-1448, 2022 | 143 | 2022 |
3D molecular cartography using LC–MS facilitated by Optimus and'ili software I Protsyuk, AV Melnik, LF Nothias, L Rappez, P Phapale, AA Aksenov, ... Nature protocols 13 (1), 134-154, 2018 | 102 | 2018 |
METASPACE: A community-populated knowledge base of spatial metabolomes in health and disease T Alexandrov, K Ovchinnikova, A Palmer, V Kovalev, A Tarasov, L Stuart, ... BioRxiv, 539478, 2019 | 57 | 2019 |
CtrA controls cell division and outer membrane composition of the pathogen Brucella abortus N Francis, K Poncin, A Fioravanti, V Vassen, K Willemart, TAP Ong, ... Molecular Microbiology 103 (5), 780-797, 2017 | 46 | 2017 |
DeepCycle reconstructs a cyclic cell cycle trajectory from unsegmented cell images using convolutional neural networks L Rappez, A Rakhlin, A Rigopoulos, S Nikolenko, T Alexandrov Molecular systems biology 16 (10), e9474, 2020 | 24 | 2020 |
Pyspacell: A python package for spatial analysis of cell images F Rose, L Rappez, SH Triana, T Alexandrov, A Genovesio Cytometry Part A 97 (3), 288-295, 2020 | 9 | 2020 |
METASPACE: A community-populated knowledge base of spatial metabolomes in health and disease. bioRxiv 2019. 539478 T Alexandrov, K Ovchinnikova, A Palmer, V Kovalev, A Tarasov, L Stuart, ... DOI 10 (53947810.1101), 539478, 0 | 4 | |
Increasing quantitation in spatial single-cell metabolomics by using fluorescence as ground truth MR Molenaar, M Shahraz, J Delafiori, A Eisenbarth, M Ekelöf, L Rappez, ... Frontiers in Molecular Biosciences 9, 1021889, 2022 | 2 | 2022 |
Label-free phenotyping of human microvessel networks L Rappez, A Akinbote, M Cherubini, V Uhlmann, K Haase bioRxiv, 2024.02. 20.581133, 2024 | 1 | 2024 |
Self-organization of vascularized skeletal muscle from bovine embryonic stem cells M Sanaki-Matsumiya, C Villava, L Rappez, K Haase, J Wu, M Ebisuya bioRxiv, 2024 | | 2024 |
Single-cell imaging mass spectrometry T Alexandrov, L Rappez US Patent 11,454,626, 2022 | | 2022 |
Identification of Molecular Mechanisms by which NASH-derived Inflammation alters Hepatic Lipid Metabolism M Stadler, L Rappez, T Alexandrov, M Heikenwälder Zeitschrift für Gastroenterologie 57 (01), P3. 28, 2019 | | 2019 |