| Gene regulatory network reconstruction using single-cell RNA sequencing of barcoded genotypes in diverse environments CA Jackson, DM Castro, GA Saldi, R Bonneau, D Gresham elife 9, e51254, 2020 | 163 | 2020 |
| High-performance single-cell gene regulatory network inference at scale: the Inferelator 3.0 CS Gibbs, CA Jackson, GA Saldi, A Tjärnberg, A Shah, A Watters, ... Bioinformatics 38 (9), 2519, 2022 | 63 | 2022 |
| Protein arginine methylation facilitates cotranscriptional recruitment of pre-mRNA splicing factors YC Chen, EJ Milliman, I Goulet, J Côté, CA Jackson, JA Vollbracht, ... Molecular and cellular biology, 2010 | 56 | 2010 |
| The C. elegans cGMP-Dependent Protein Kinase EGL-4 Regulates Nociceptive Behavioral Sensitivity MC Krzyzanowski, C Brueggemann, MJ Ezak, JF Wood, KL Michaels, ... PLoS genetics 9 (7), e1003619, 2013 | 41 | 2013 |
| Optimal tuning of weighted kNN-and diffusion-based methods for denoising single cell genomics data A Tjärnberg, O Mahmood, CA Jackson, GA Saldi, K Cho, LA Christiaen, ... PLoS computational biology 17 (1), e1008569, 2021 | 36 | 2021 |
| The protein arginine methyltransferase PRMT5 promotes D2-like dopamine receptor signaling N Likhite, CA Jackson, MS Liang, MC Krzyzanowski, P Lei, JF Wood, ... Science signaling 8 (402), ra115-ra115, 2015 | 28 | 2015 |
| Microfluidic nano-scale qPCR enables ultra-sensitive and quantitative detection of SARS-CoV-2 X Xie, T Gjorgjieva, Z Attieh, MM Dieng, M Arnoux, M Khair, Y Moussa, ... Processes 8 (11), 1425, 2020 | 24 | 2020 |
| Proteomic analysis of interactors for yeast protein arginine methyltransferase Hmt1 reveals novel substrate and insights into additional biological roles CA Jackson, N Yadav, S Min, J Li, EJ Milliman, J Qu, YC Chen, MC Yu Proteomics 12 (22), 3304-3314, 2012 | 16 | 2012 |
| New horizons in the stormy sea of multimodal single-cell data integration CA Jackson, C Vogel Molecular cell 82 (2), 248-259, 2022 | 13 | 2022 |
| Protein arginine methylation of Npl3 promotes splicing of the SUS1 intron harboring non-consensus 5′ splice site and branch site B Muddukrishna, CA Jackson, CY Michael Biochimica et Biophysica Acta (BBA)-Gene Regulatory Mechanisms 1860 (6), 730-739, 2017 | 12 | 2017 |
| Structure-primed embedding on the transcription factor manifold enables transparent model architectures for gene regulatory network and latent activity inference A Tjärnberg, M Beheler-Amass, CA Jackson, LA Christiaen, D Gresham, ... Genome biology 25 (1), 24, 2024 | 4 | 2024 |
| Robust repression of tRNA gene transcription during stress requires protein arginine methylation RB Davis, N Likhite, CA Jackson, T Liu, CY Michael Life Science Alliance 2 (3), 2019 | 4 | 2019 |
| Detection of Protein Arginine Methylation in Saccharomyces cerevisiae CA Jackson, MC Yu Yeast Protocols, 229-247, 2014 | 2 | 2014 |
| Xylose metabolizing yeast H Xu, D SATORY, C Jackson | 1 | 2019 |
| Simultaneous estimation of gene regulatory network structure and RNA kinetics from single cell gene expression CA Jackson, M Beheler-Amass, A Tjärnberg, I Suresh, AS Hickey, ... bioRxiv, 2023 | | 2023 |
| A Bright IDEA C Jackson, D Gresham Molecular systems biology 16 (4), e9502, 2020 | | 2020 |
| Protein l-Arginine Methylation of RNA-Binding Proteins and Their Impact on Human Diseases MC Yu, CA Jackson L-Arginine in Clinical Nutrition, 189-199, 2017 | | 2017 |
Richard BonneauGenentech在 gene.com 的电子邮件经过验证
Richard BonneauGenentech在 gene.com 的电子邮件经过验证
David GreshamNew York University在 nyu.edu 的电子邮件经过验证
Andreas TjärnbergCenter for Genomics and Systems Biology, NYU在 nyu.edu 的电子邮件经过验证