| Transition to invasive breast cancer is associated with progressive changes in the structure and composition of tumor stroma T Risom, DR Glass, I Averbukh, CC Liu, A Baranski, A Kagel, ... Cell 185 (2), 299-310. e18, 2022 | 252 | 2022 |
| Dynamic CD8+ T cell responses to cancer immunotherapy in human regional lymph nodes are disrupted in metastatic lymph nodes MK Rahim, TLH Okholm, KB Jones, EE McCarthy, CC Liu, JL Yee, ... Cell 186 (6), 1127-1143. e18, 2023 | 185 | 2023 |
| Broad immune activation underlies shared set point signatures for vaccine responsiveness in healthy individuals and disease activity in patients with lupus Y Kotliarov, R Sparks, AJ Martins, MP Mulè, Y Lu, M Goswami, L Kardava, ... Nature medicine 26 (4), 618-629, 2020 | 170 | 2020 |
| Multiomics characterization of preterm birth in low-and middle-income countries F Jehan, S Sazawal, AH Baqui, MI Nisar, U Dhingra, R Khanam, M Ilyas, ... JAMA network open 3 (12), e2029655-e2029655, 2020 | 72 | 2020 |
| Combined protein and nucleic acid imaging reveals virus-dependent B cell and macrophage immunosuppression of tissue microenvironments S Jiang, CN Chan, X Rovira-Clavé, H Chen, Y Bai, B Zhu, E McCaffrey, ... Immunity 55 (6), 1118-1134. e8, 2022 | 66 | 2022 |
| Robust phenotyping of highly multiplexed tissue imaging data using pixel-level clustering CC Liu, NF Greenwald, A Kong, EF McCaffrey, KX Leow, D Mrdjen, ... Nature Communications 14 (1), 4618, 2023 | 43 | 2023 |
| Computational approaches for characterizing the tumor immune microenvironment CC Liu, CB Steen, AM Newman Immunology 158 (2), 70-84, 2019 | 41 | 2019 |
| Reproducible, high-dimensional imaging in archival human tissue by multiplexed ion beam imaging by time-of-flight (MIBI-TOF) CC Liu, M Bosse, A Kong, A Kagel, R Kinders, SM Hewitt, S Varma, ... Laboratory Investigation 102 (7), 762-770, 2022 | 26 | 2022 |
| Multiplexed ion beam imaging: insights into pathobiology CC Liu, EF McCaffrey, NF Greenwald, E Soon, T Risom, K Vijayaragavan, ... Annual Review of Pathology: Mechanisms of Disease 17 (1), 403-423, 2022 | 25 | 2022 |
| Single-synapse analyses of Alzheimer’s disease implicate pathologic tau, DJ1, CD47, and ApoE T Phongpreecha, CR Gajera, CC Liu, K Vijayaragavan, AL Chang, ... Science Advances 7 (51), eabk0473, 2021 | 20 | 2021 |
| Multiplexed imaging reveals an IFN-γ-driven inflammatory state in nivolumab-associated gastritis S Ferrian, CC Liu, EF McCaffrey, R Kumar, TS Nowicki, DW Dawson, ... Cell Reports Medicine 2 (10), 2021 | 17 | 2021 |
| Single-cell transcriptomic profiling of the hypothalamic median eminence during aging ZH Chen, S Li, M Xu, CC Liu, H Ye, B Wang, QF Wu Journal of Genetics and Genomics 49 (6), 523-536, 2022 | 10 | 2022 |
| Virus-dependent immune conditioning of tissue microenvironments S Jiang, CN Chan, X Rovira-Clave, H Chen, Y Bai, B Zhu, E McCaffrey, ... Biorxiv, 2021.05. 21.444548, 2021 | 10 | 2021 |
| Spatial proteomics reveals human microglial states shaped by anatomy and neuropathology D Mrdjen, M Amouzgar, B Cannon, C Liu, A Spence, E McCaffrey, ... Research Square, 2023 | 7 | 2023 |
| A unified metric of human immune health R Sparks, N Rachmaninoff, WW Lau, DC Hirsch, N Bansal, AJ Martins, ... Nature Medicine 30 (9), 2461-2472, 2024 | 4 | 2024 |
| Automated classification of cellular expression in multiplexed imaging data with Nimbus JL Rumberger, NF Greenwald, JS Ranek, P Boonrat, C Walker, J Franzen, ... bioRxiv, 2024 | 2 | 2024 |
| Synthesis, characterization, and applications of a superior dendrimer-based polymer for multiplexed ion beam imaging time-of-flight analysis R Kumar, CC Liu, SC Bendall, M Angelo Biomacromolecules 24 (7), 3105-3114, 2023 | 2 | 2023 |
| OMiCC: An expanded and enhanced platform for meta-analysis of public gene expression data CC Liu, Y Guo, KL Vrindten, WW Lau, R Sparks, JS Tsang STAR protocols 3 (3), 101474, 2022 | 1 | 2022 |
| Dynamic CD8+ T cell responses to cancer immunotherapy in human regional lymph nodes are disrupted by metastasis MK Rahim, TLH Okholm, KB Jones, EE McCarthy, CC Liu, JL Yee, ... bioRxiv, 2022.11. 08.513062, 2022 | | 2022 |
| STRUCTURE OF THE TUMOR STROMA PREDICTS INVASIVE BREAST CANCER RELAPSE T Risom, DR Glass, I Averbukh, CC Liu, A Baranski, A Kagel CANCER DISCOVERY 12 (3), 597-597, 2022 | | 2022 |
