| Genome-wide mapping of SARS-CoV-2 RNA structures identifies therapeutically-relevant elements I Manfredonia, C Nithin, A Ponce-Salvatierra, P Ghosh, TK Wirecki, ... Nucleic Acids Research, gkaa1053, 2020 | 232* | 2020 |
| Targeting non-coding RNAs in plants with the CRISPR-Cas technology is a challenge yet worth accepting J Basak, C Nithin Frontiers in plant science 6, 1001, 2015 | 67 | 2015 |
| QRNAS: software tool for refinement of nucleic acid structures J Stasiewicz, S Mukherjee, C Nithin, JM Bujnicki BMC Structural Biology 19 (5), 1-11, 2019 | 61 | 2019 |
| Bioinformatics tools and benchmarks for computational docking and 3D structure prediction of RNA-protein complexes C Nithin, P Ghosh, JM Bujnicki Genes 9 (Computational Analysis of RNA Structure), 432, 2018 | 46 | 2018 |
| Computational modeling of RNA 3D structure based on experimental data A Ponce-Salvatierra, Astha, K Merdas, C Nithin, P Ghosh, S Mukherjee, ... Bioscience Reports, 10.1042/BSR20180430, 2019 | 43 | 2019 |
| Molecular architecture of protein-RNA recognition sites A Barik, C Nithin, SP Pilla, RP Bahadur Journal of Biomolecular Structure and Dynamics, 1-14, 2015 | 43 | 2015 |
| A protein–RNA docking benchmark (I): Nonredundant cases A Barik, C Nithin, P Manasa, RP Bahadur Proteins: Structure, Function, and Bioinformatics 80 (7), 1866-1871, 2012 | 43 | 2012 |
| Probing binding hot spots at protein–RNA recognition sites A Barik, C Nithin, NBR Karampudi, S Mukherjee, RP Bahadur Nucleic acids research 44 (2), e9-e9, 2016 | 37 | 2016 |
| Genome-wide identification of miRNAs and lncRNAs in Cajanus cajan C Nithin, A Thomas, J Basak, RP Bahadur BMC genomics 18, 1-14, 2017 | 34 | 2017 |
| A non‐redundant protein–RNA docking benchmark version 2.0 C Nithin, S Mukherjee, RP Bahadur Proteins: Structure, Function, and Bioinformatics 85 (2), 256–267, 2017 | 33 | 2017 |
| Computational prediction of miRNAs and their targets in Phaseolus vulgaris using simple sequence repeat signatures C Nithin, N Patwa, A Thomas, RP Bahadur, J Basak BMC Plant Biology 15, 1-16, 2015 | 32 | 2015 |
| Modeling of Three-Dimensional RNA Structures Using SimRNA TK Wirecki, C Nithin, S Mukherjee, JM Bujnicki, MJ Boniecki Protein Structure Prediction (Part of the Methods in Molecular Biology book …, 2020 | 17 | 2020 |
| MAPIYA contact map server for identification and visualization of molecular interactions in proteins and biological complexes AE Badaczewska-Dawid, C Nithin, K Wroblewski, M Kurcinski, S Kmiecik Nucleic Acids Research 50 (W1), W474-W482, 2022 | 16 | 2022 |
| Constrained peptides mimic a viral suppressor of RNA silencing A Kuepper, NM McLoughlin, S Neubacher, A Yeste-Vázquez, ... Nucleic acids research 49 (22), 12622-12633, 2021 | 16 | 2021 |
| Identification and characterization of differentially expressed Phaseolus vulgaris miRNAs and their targets during mungbean yellow mosaic India virus infection reveals new … N Patwa, C Nithin, RP Bahadur, J Basak Genomics 111 (6), 1333-1342, 2018 | 16 | 2018 |
| Computational pipeline for reference-free comparative analysis of RNA 3D structures applied to SARS-CoV-2 UTR models J Gumna, M Antczak, RW Adamiak, JM Bujnicki, SJ Chen, F Ding, ... International Journal of Molecular Sciences 23 (17), 9630, 2022 | 13* | 2022 |
| RNA and DNA G-quadruplexes bind to human dicer and inhibit its activity N Koralewska, A Szczepanska, K Ciechanowska, M Wojnicka, ... Cellular and Molecular Life Sciences 78 (7), 3709-3724, 2021 | 11 | 2021 |
| A structure-based model for the prediction of protein-RNA binding affinity C Nithin, S Mukherjee, RP Bahadur RNA, doi:10.1261/rna.071779.119, 2019 | 11 | 2019 |
| Dissecting water binding sites at protein–protein interfaces: a lesson from the atomic structures in the Protein Data Bank S Mukherjee, C Nithin, Y Divakaruni, RP Bahadur Journal of Biomolecular Structure and Dynamics 37 (5), 1204-1219, 2019 | 9 | 2019 |
| Molecular insights into RNA recognition and gene regulation by the TRIM-NHL protein Mei-P26 A Salerno-Kochan, A Horn, P Ghosh, C Nithin, A Kościelniak, A Meindl, ... Life Science Alliance 5 (8), 2022 | 3 | 2022 |
Janusz BujnickiProfessor of Biology, International Institute of Molecular and Cell Biology in Warsaw在 iimcb.gov.pl 的电子邮件经过验证
