Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition)1 DJ Klionsky, AK Abdel-Aziz, S Abdelfatah, M Abdellatif, A Abdoli, S Abel, ... autophagy 17 (1), 1-382, 2021 | 13274* | 2021 |
HemI: a toolkit for illustrating heatmaps W Deng, Y Wang, Z Liu, H Cheng, Y Xue PloS one 9 (11), e111988, 2014 | 971 | 2014 |
IBS: an illustrator for the presentation and visualization of biological sequences W Liu, Y Xie, J Ma, X Luo, P Nie, Z Zuo, U Lahrmann, Q Zhao, Y Zheng, ... Bioinformatics 31 (20), 3359-3361, 2015 | 875 | 2015 |
GPS 2.0, a tool to predict kinase-specific phosphorylation sites in hierarchy Y Xue, J Ren, X Gao, C Jin, L Wen, X Yao Molecular & cellular proteomics 7 (9), 1598-1608, 2008 | 795 | 2008 |
DOG 1.0: illustrator of protein domain structures J Ren, L Wen, X Gao, C Jin, Y Xue, X Yao Cell research 19 (2), 271-273, 2009 | 615 | 2009 |
CSS-Palm 2.0: an updated software for palmitoylation sites prediction J Ren, L Wen, X Gao, C Jin, Y Xue, X Yao Protein Engineering, Design & Selection 21 (11), 639-644, 2008 | 615 | 2008 |
GPS-SUMO: a tool for the prediction of sumoylation sites and SUMO-interaction motifs Q Zhao, Y Xie, Y Zheng, S Jiang, W Liu, W Mu, Z Liu, Y Zhao, Y Xue, ... Nucleic acids research 42 (W1), W325-W330, 2014 | 544 | 2014 |
Database resources of the national genomics data center, China national center for bioinformation in 2022 Nucleic Acids Research 50 (D1), D27-D38, 2022 | 491 | 2022 |
A self-adaptive artificial bee colony algorithm based on global best for global optimization Y Xue, J Jiang, B Zhao, T Ma Soft Computing 22, 2935-2952, 2018 | 411 | 2018 |
Inhibiting PD-L1 palmitoylation enhances T-cell immune responses against tumours H Yao, J Lan, C Li, H Shi, JP Brosseau, H Wang, H Lu, C Fang, Y Zhang, ... Nature biomedical engineering 3 (4), 306-317, 2019 | 325 | 2019 |
Self-adaptive particle swarm optimization for large-scale feature selection in classification Y Xue, B Xue, M Zhang ACM Transactions on Knowledge Discovery from Data (TKDD) 13 (5), 1-27, 2019 | 307 | 2019 |
GPS: a comprehensive www server for phosphorylation sites prediction Y Xue, F Zhou, M Zhu, K Ahmed, G Chen, X Yao Nucleic acids research 33 (suppl_2), W184-W187, 2005 | 300 | 2005 |
Systematic study of protein sumoylation: Development of a site‐specific predictor of SUMOsp 2.0 J Ren, X Gao, C Jin, M Zhu, X Wang, A Shaw, L Wen, X Yao, Y Xue Proteomics 9 (12), 3409-3412, 2009 | 298 | 2009 |
GPS 2.1: enhanced prediction of kinase-specific phosphorylation sites with an algorithm of motif length selection Y Xue, Z Liu, J Cao, Q Ma, X Gao, Q Wang, C Jin, Y Zhou, L Wen, J Ren Protein Engineering, Design & Selection 24 (3), 255-260, 2011 | 293 | 2011 |
AnimalTFDB 2.0: a resource for expression, prediction and functional study of animal transcription factors HM Zhang, T Liu, CJ Liu, S Song, X Zhang, W Liu, H Jia, Y Xue, AY Guo Nucleic acids research 43 (D1), D76-D81, 2015 | 288 | 2015 |
GPS-SNO: computational prediction of protein S-nitrosylation sites with a modified GPS algorithm Y Xue, Z Liu, X Gao, C Jin, L Wen, X Yao, J Ren PloS one 5 (6), e11290, 2010 | 280 | 2010 |
Plasma proteomics identify biomarkers and pathogenesis of COVID-19 T Shu, W Ning, D Wu, J Xu, Q Han, M Huang, X Zou, Q Yang, Y Yuan, ... Immunity 53 (5), 1108-1122. e5, 2020 | 258 | 2020 |
PPSP: prediction of PK-specific phosphorylation site with Bayesian decision theory Y Xue, A Li, L Wang, H Feng, X Yao BMC bioinformatics 7, 1-12, 2006 | 258 | 2006 |
GPS 5.0: an update on the prediction of kinase-specific phosphorylation sites in proteins C Wang, H Xu, S Lin, W Deng, J Zhou, Y Zhang, Y Shi, D Peng, Y Xue Genomics, Proteomics and Bioinformatics 18 (1), 72-80, 2020 | 249 | 2020 |
SUMOsp: a web server for sumoylation site prediction Y Xue, F Zhou, C Fu, Y Xu, X Yao Nucleic acids research 34 (suppl_2), W254-W257, 2006 | 243 | 2006 |