A large and consistent phylogenomic dataset supports sponges as the sister group to all other animals P Simion, H Philippe, D Baurain, M Jager, DJ Richter, A Di Franco, ... Current Biology 27 (7), 958-967, 2017 | 499 | 2017 |
A phylogenomic framework and timescale for comparative studies of tunicates F Delsuc, H Philippe, G Tsagkogeorga, P Simion, MK Tilak, X Turon, ... BMC Biology 16 (1), 39, 2018 | 163 | 2018 |
ANISEED 2017: extending the integrated ascidian database to the exploration and evolutionary comparison of genome-scale datasets M Brozovic, C Dantec, J Dardaillon, D Dauga, E Faure, M Gineste, ... Nucleic acids research 46 (D1), D718-D725, 2018 | 106 | 2018 |
A software tool ‘CroCo’detects pervasive cross-species contamination in next generation sequencing data P Simion, K Belkhir, C François, J Veyssier, JC Rink, M Manuel, ... BMC biology 16, 1-9, 2018 | 89 | 2018 |
ANISEED 2015: a digital framework for the comparative developmental biology of ascidians M Brozovic, C Martin, C Dantec, D Dauga, M Mendez, P Simion, ... Nucleic acids research 44 (D1), D808-D818, 2016 | 76 | 2016 |
Is adaptation limited by mutation? A timescale-dependent effect of genetic diversity on the adaptive substitution rate in animals M Rousselle, P Simion, MK Tilak, E Figuet, B Nabholz, N Galtier PLOS Genetics 16 (4), e1008668, 2020 | 65* | 2020 |
To What Extent Current Limits of Phylogenomics Can Be Overcome? P Simion, F Delsuc, H Philippe Phylogenetics in the Genomic Era, 2.1: 1--2.1: 34, 2020 | 50 | 2020 |
Chromosome-level genome assembly reveals homologous chromosomes and recombination in asexual rotifer Adineta vaga P Simion, J Narayan, A Houtain, A Derzelle, L Baudry, E Nicolas, R Arora, ... Science Advances 7 (41), eabg4216, 2021 | 47* | 2021 |
ANISEED 2019: 4D exploration of genetic data for an extended range of tunicates J Dardaillon, D Dauga, P Simion, E Faure, TA Onuma, MB DeBiasse, ... Nucleic acids research 48 (D1), D668-D675, 2020 | 46 | 2020 |
Exploring the potential of small RNA subunit and ITS sequences for resolving phylogenetic relationships within the phylum Ctenophora P Simion, N Bekkouche, M Jager, E Quéinnec, M Manuel Zoology 118 (2), 102-114, 2015 | 41 | 2015 |
Convergent Acquisition of Nonembryonic Development in Styelid Ascidians A Alié, LS Hiebert, P Simion, M Scelzo, MM Prünster, S Lotito, F Delsuc, ... Molecular biology and evolution 35 (7), 1728-1743, 2018 | 40 | 2018 |
Convergent consequences of parthenogenesis on stick insect genomes KS Jaron, DJ Parker, Y Anselmetti, P Tran Van, J Bast, Z Dumas, E Figuet, ... Science advances 8 (8), eabg3842, 2022 | 33 | 2022 |
Skeletal Mineralization in Association with Type X Collagen Expression Is an Ancestral Feature for Jawed Vertebrates M Debiais-Thibaud, P Simion, S Ventéo, D Muñoz, S Marcellini, S Mazan, ... Molecular biology and evolution 36 (10), 2265-2276, 2019 | 32 | 2019 |
Haplotype divergence supports long-term asexuality in the oribatid mite Oppiella nova A Brandt, P Tran Van, C Bluhm, Y Anselmetti, Z Dumas, E Figuet, ... Proceedings of the National Academy of Sciences 118 (38), e2101485118, 2021 | 28 | 2021 |
Evolution of dental tissue mineralization: an analysis of the jawed vertebrate SPARC and SPARC-L families S Enault, D Muñoz, P Simion, S Ventéo, JY Sire, S Marcellini, ... BMC Evolutionary Biology 18, 1-12, 2018 | 22 | 2018 |
A phylogenetic framework of the legume genus Aeschynomene for comparative genetic analysis of the Nod-dependent and Nod-independent symbioses L Brottier, C Chaintreuil, P Simion, C Scornavacca, R Rivallan, P Mournet, ... BMC plant biology 18, 1-15, 2018 | 19 | 2018 |
First annotated draft genomes of nonmarine ostracods (Ostracoda, Crustacea) with different reproductive modes P Tran Van, Y Anselmetti, J Bast, Z Dumas, N Galtier, KS Jaron, K Martens, ... G3 11 (4), jkab043, 2021 | 12 | 2021 |
Horizontal acquisition of a DNA ligase improves DNA damage tolerance in eukaryotes E Nicolas, P Simion, M Guérineau, M Terwagne, M Colinet, J Virgo, ... Nature Communications 14 (1), 7638, 2023 | 4 | 2023 |
Les cténophores: de leur position dans l'arbre des métazoaires (approche phylogénomique) à leur diversité taxonomique (phylogénie moléculaire et anatomie comparée) P Simion Université Pierre et Marie Curie-Paris VI, 2014 | | 2014 |
BASAL METAZOANS D Erpenbeck, S Paul, M Manuel, P Cartwright, O Voigt, G Wörheide | | |