| deepTools2: a next generation web server for deep-sequencing data analysis F Ramírez, DP Ryan, B Grüning, V Bhardwaj, F Kilpert, AS Richter, ... Nucleic acids research 44 (Web Server issue), W160, 2016 | 5554 | 2016 |
| Bioconda: sustainable and comprehensive software distribution for the life sciences B Grüning, R Dale, A Sjödin, BA Chapman, J Rowe, CH Tomkins-Tinch, ... Nature methods 15 (7), 475-476, 2018 | 854 | 2018 |
| Rapamycin extends murine lifespan but has limited effects on aging F Neff, D Flores-Dominguez, DP Ryan, M Horsch, S Schröder, T Adler, ... The Journal of clinical investigation 123 (8), 3272-3291, 2013 | 398 | 2013 |
| Mutations in potassium channel Kir2. 6 cause susceptibility to thyrotoxic hypokalemic periodic paralysis DP Ryan, MRD da Silva, TW Soong, B Fontaine, MR Donaldson, ... Cell 140 (1), 88-98, 2010 | 361 | 2010 |
| Community-driven data analysis training for biology B Batut, S Hiltemann, A Bagnacani, D Baker, V Bhardwaj, C Blank, ... Cell systems 6 (6), 752-758. e1, 2018 | 179 | 2018 |
| Mechanisms of RNA-induced toxicity in CAG repeat disorders R Nalavade, N Griesche, DP Ryan, S Hildebrand, S Krauss Cell death & disease 4 (8), e752-e752, 2013 | 178 | 2013 |
| snakePipes: facilitating flexible, scalable and integrative epigenomic analysis V Bhardwaj, S Heyne, K Sikora, L Rabbani, M Rauer, F Kilpert, AS Richter, ... Bioinformatics 35 (22), 4757-4759, 2019 | 128 | 2019 |
| Epigenetic alterations in longevity regulators, reduced life span, and exacerbated aging-related pathology in old father offspring mice K Xie, DP Ryan, BL Pearson, KS Henzel, F Neff, RO Vidal, M Hennion, ... Proceedings of the National Academy of Sciences 115 (10), E2348-E2357, 2018 | 122 | 2018 |
| The anti-diabetic drug metformin reduces BACE1 protein level by interfering with the MID1 complex MM Hettich, F Matthes, DP Ryan, N Griesche, S Schröder, S Dorn, ... PloS one 9 (7), e102420, 2014 | 107 | 2014 |
| Episodic neurological channelopathies DP Ryan, LJ Ptáček Neuron 68 (2), 282-292, 2010 | 106 | 2010 |
| Every-other-day feeding extends lifespan but fails to delay many symptoms of aging in mice K Xie, F Neff, A Markert, J Rozman, JA Aguilar-Pimentel, OV Amarie, ... Nature communications 8 (1), 155, 2017 | 104 | 2017 |
| .(2016) deepTools2: a next generation web server for deepsequencing data analysis F Ramírez, DP Ryan, B Grüning, V Bhardwaj, F Kilpert, AS Richter Nucleic Acids Res 44, W160-W165, 0 | 84 | |
| A paternal methyl donor-rich diet altered cognitive and neural functions in offspring mice DP Ryan, KS Henzel, BL Pearson, ME Siwek, A Papazoglou, L Guo, ... Molecular psychiatry 23 (5), 1345-1355, 2018 | 66 | 2018 |
| Complete loss of H3K9 methylation dissolves mouse heterochromatin organization T Montavon, N Shukeir, G Erikson, B Engist, M Onishi-Seebacher, D Ryan, ... Nature communications 12 (1), 4359, 2021 | 51 | 2021 |
| Adult‐onset fluoxetine treatment does not improve behavioral impairments and may have adverse effects on the Ts65Dn mouse model of Down syndrome M Heinen, MM Hettich, DP Ryan, S Schnell, K Paesler, D Ehninger Neural Plasticity 2012 (1), 467251, 2012 | 51 | 2012 |
| Limited Effects of an eIF2αS51A Allele on Neurological Impairments in the 5xFAD Mouse Model of Alzheimer’s Disease K Paesler, K Xie, MM Hettich, ME Siwek, DP Ryan, S Schröder, ... Neural Plasticity 2015 (1), 825157, 2015 | 32 | 2015 |
| RELACS nuclei barcoding enables high-throughput ChIP-seq L Arrigoni, H Al-Hasani, F Ramírez, I Panzeri, DP Ryan, D Santacruz, ... Communications biology 1 (1), 214, 2018 | 30 | 2018 |
| High-dose maternal folic acid supplementation before conception impairs reversal learning in offspring mice KS Henzel, DP Ryan, S Schröder, M Weiergräber, D Ehninger Scientific reports 7 (1), 3098, 2017 | 22 | 2017 |
| Bison: bisulfite alignment on nodes of a cluster DP Ryan, D Ehninger BMC bioinformatics 15, 1-13, 2014 | 22 | 2014 |
| Foxd3 controls heterochromatin‐mediated repression of repeat elements and 2‐cell state transcription D Puri, B Koschorz, B Engist, M Onishi‐Seebacher, D Ryan, M Soujanya, ... EMBO reports 22 (12), e53180, 2021 | 11 | 2021 |
