Proteomics, post-translational modifications, and integrative analyses reveal molecular heterogeneity within medulloblastoma subgroups TC Archer, T Ehrenberger, F Mundt, MP Gold, K Krug, CK Mah, ... Cancer Cell 34 (3), 396-410. e8, 2018 | 176 | 2018 |
Chromatin landscapes reveal developmentally encoded transcriptional states that define human glioblastoma SC Mack, I Singh, X Wang, R Hirsch, Q Wu, R Villagomez, JA Bernatchez, ... Journal of Experimental Medicine 216 (5), 1071-1090, 2019 | 102 | 2019 |
Decomposing oncogenic transcriptional signatures to generate maps of divergent cellular states JW Kim, OO Abudayyeh, H Yeerna, CH Yeang, M Stewart, RW Jenkins, ... Cell Systems 5 (2), 105-118. e9, 2017 | 41 | 2017 |
Bento: a toolkit for subcellular analysis of spatial transcriptomics data CK Mah, N Ahmed, NA Lopez, DC Lam, A Pong, A Monell, C Kern, Y Han, ... Genome Biology 25 (1), 82, 2024 | 14 | 2024 |
An accessible, interactive GenePattern Notebook for analysis and exploration of single-cell transcriptomic data CK Mah, AT Wenzel, EF Juarez, T Tabor, MM Reich, JP Mesirov F1000Research 7, 2018 | 10 | 2018 |
An accessible GenePattern notebook for the copy number variation analysis of Illumina Infinium DNA methylation arrays CK Mah, JP Mesirov, L Chavez F1000Research 7, 2018 | 5 | 2018 |
Computational cell–cell interaction technologies drive mechanistic and biomarker discovery in the tumor microenvironment A Pong, CK Mah, GW Yeo, NE Lewis Current Opinion in Biotechnology 85, 103048, 2024 | 4 | 2024 |
Automated, miniaturized, and scalable screening of healthcare workers, first responders, and students for SARS-CoV-2 in San Diego County SC Morgan, S Aigner, C Anderson, P Belda-Ferre, P De Hoff, CA Marotz, ... medRxiv, 2021.06. 25.21257885, 2021 | 1 | 2021 |
Computational Frameworks for Functional Subcellular Analysis of Spatial Transcriptomics Data CK Mah University of California, San Diego, 2023 | | 2023 |
Integrated omics modeling of transcriptional regulation in medulloblastoma subtypes OS Chapman, T Ehrenberger, TC Archer, MP Gold, F Mundt, M Adam, ... Cancer Research 80 (16_Supplement), 447-447, 2020 | | 2020 |
INSPECT sample tracking system S Sathe, C Mah, N Ahmed, MF Ragsac, J Williams | | 2020 |