InnateDB: systems biology of innate immunity and beyond—recent updates and continuing curation K Breuer, AK Foroushani, MR Laird, C Chen, A Sribnaia, R Lo, GL Winsor, ... Nucleic acids research 41 (D1), D1228-D1233, 2013 | 1208 | 2013 |
The genome sequence of taurine cattle: a window to ruminant biology and evolution Bovine Genome Sequencing and Analysis Consortium, CG Elsik, ... Science 324 (5926), 522-528, 2009 | 1143 | 2009 |
Genome-wide survey of SNP variation uncovers the genetic structure of cattle breeds Bovine HapMap Consortium, RA Gibbs, JF Taylor, CP Van Tassell, ... Science 324 (5926), 528-532, 2009 | 997 | 2009 |
Protein interaction data curation: the International Molecular Exchange (IMEx) consortium S Orchard, S Kerrien, S Abbani, B Aranda, J Bhate, S Bidwell, A Bridge, ... Nature methods 9 (4), 345-350, 2012 | 565 | 2012 |
InnateDB: facilitating systems‐level analyses of the mammalian innate immune response DJ Lynn, GL Winsor, C Chan, N Richard, MR Laird, A Barsky, JL Gardy, ... Molecular systems biology 4 (1), 218, 2008 | 416 | 2008 |
Bioinformatic discovery and initial characterisation of nine novel antimicrobial peptide genes in the chicken DJ Lynn, R Higgs, S Gaines, J Tierney, T James, AT Lloyd, MA Fares, ... Immunogenetics 56, 170-177, 2004 | 316 | 2004 |
PSICQUIC and PSISCORE: accessing and scoring molecular interactions B Aranda, H Blankenburg, S Kerrien, FSL Brinkman, A Ceol, E Chautard, ... Nature methods 8 (7), 528-529, 2011 | 309 | 2011 |
The genome sequence of taurine cattle: a window to ruminant biology and evolution TBG Sequencing, CG Elsik, RL Tellam, KC Worley, Analysis Consortium Science (New York, NY) 324 (5926), 522, 2009 | 295 | 2009 |
Induction of a Novel Chicken Toll-Like Receptor following Salmonella enterica Serovar Typhimurium Infection R Higgs, P Cormican, S Cahalane, B Allan, AT Lloyd, K Meade, T James, ... Infection and immunity 74 (3), 1692-1698, 2006 | 259 | 2006 |
Synonymous codon usage is subject to selection in thermophilic bacteria DJ Lynn, GAC Singer, DA Hickey Nucleic acids research 30 (19), 4272-4277, 2002 | 253 | 2002 |
The bovine lactation genome: insights into the evolution of mammalian milk DG Lemay, DJ Lynn, WF Martin, MC Neville, TM Casey, G Rincon, ... Genome biology 10, 1-18, 2009 | 251 | 2009 |
Avian beta-defensin nomenclature: a community proposed update DJ Lynn, R Higgs, AT Lloyd, C O'Farrelly, V Hervé-Grépinet, Y Nys, ... Immunology letters 110 (1), 86-89, 2007 | 206 | 2007 |
Long-term perturbation of the peripheral immune system months after SARS-CoV-2 infection FJ Ryan, CM Hope, MG Masavuli, MA Lynn, ZA Mekonnen, AEL Yeow, ... BMC medicine 20, 1-23, 2022 | 205 | 2022 |
Genome-wide associations for milk production and somatic cell score in Holstein-Friesian cattle in Ireland BK Meredith, FJ Kearney, EK Finlay, DG Bradley, AG Fahey, DP Berry, ... BMC genetics 13, 1-11, 2012 | 190 | 2012 |
Genome-wide association study of intraocular pressure uncovers new pathways to glaucoma S MacGregor, JS Ong, J An, X Han, T Zhou, OM Siggs, MH Law, ... Nature genetics 50 (8), 1067-1071, 2018 | 172 | 2018 |
Modulation of immune responses to vaccination by the microbiota: implications and potential mechanisms DJ Lynn, SC Benson, MA Lynn, B Pulendran Nature Reviews Immunology 22 (1), 33-46, 2022 | 171 | 2022 |
Early-life antibiotic-driven dysbiosis leads to dysregulated vaccine immune responses in mice MA Lynn, DJ Tumes, JM Choo, A Sribnaia, SJ Blake, LEX Leong, ... Cell host & microbe 23 (5), 653-660. e5, 2018 | 169 | 2018 |
Identification of a human neonatal immune-metabolic network associated with bacterial infection CL Smith, P Dickinson, T Forster, M Craigon, A Ross, MR Khondoker, ... Nature communications 5 (1), 4649, 2014 | 152 | 2014 |
Enabling a systems biology approach to immunology: focus on innate immunity JL Gardy, DJ Lynn, FSL Brinkman, REW Hancock Trends in immunology 30 (6), 249-262, 2009 | 152 | 2009 |
The early whole-blood transcriptional signature of dengue virus and features associated with progression to dengue shock syndrome in Vietnamese children and young adults LT Hoang, DJ Lynn, M Henn, BW Birren, NJ Lennon, PT Le, KTH Duong, ... Journal of virology 84 (24), 12982-12994, 2010 | 149 | 2010 |